Gene: AT3G63520
     


Gene description


TAIR ID: AT3G63520

Short description: carotenoid cleavage dioxygenase 1

Pathogen responsiveness: -0.83

General responsiveness: -0.02

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G057243  

Wheat: No orthologous gene

GO biological process


carotenoid catabolic process, response to water deprivation, xanthophyll catabolic process, oxidation-reduction process, carotene catabolic process


GO cellular component


Golgi apparatus, plasma membrane, cytoplasm, vacuole, vacuolar membrane, plasmodesma


GO molecular function


metal ion binding, 9-cis-epoxycarotenoid dioxygenase activity


Protein domain


PfamPF03055, Retinal pigment epithelial membrane protein

KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G61850

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


12 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.514.80E-05
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-1.721.62E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.682.03E-12
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-1.664.25E-05
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.691.81E-06
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-1.687.49E-11
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h-1.503.62E-08
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-1.671.68E-10
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-1.691.29E-09
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-1.721.46E-10
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h-1.961.49E-11
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.581.68E-03






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