Gene: AT3G61890
     

Gene description


TAIR ID: AT3G61890

Short description: homeobox 12

Pathogen responsiveness: 0.52

General responsiveness: 1.54

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat:

TAAFFX.31525.1.S1_AT  


GO biological process


multicellular organism development, response to virus, regulation of transcription, DNA-templated, positive regulation of transcription, response to osmotic stress, response to abscisic acid, response to water deprivation, transcription, response to salt stress


GO cellular component


nucleus


GO molecular function


protein binding, transcription factor activity, sequence-specific DNA binding


Protein domain


PfamPF00046, Homeobox domain
PfamPF02183, Homeobox associated leucine zipper
SMARTSM00389, HOX

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT4G16110, AT2G43010

Target:
AT4G25420

Protein-protein interaction network


The number of partners (degree) is: 21 (Top10%)

click to view PPI network

Differentially expressed condition


36 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE13739Col, WT, control 7 dCol, WT, G.orontii 7 d-1.744.45E-03
GSE13739Col, eds, control 7 dCol, eds, G.orontii 7 d-1.785.41E-03
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 2 h-2.471.01E-02
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d-2.003.65E-02
GSE17464Laer, controlLaer, Flg22 1 h-2.427.13E-03
GSE17464Laer, controlLaer, Flg22 2 h-2.279.88E-03
GSE17464Penta, controlPenta, Flg22 2 h-3.471.14E-04
GSE17464Penta, controlPenta, Flg22 2 h-2.781.64E-03
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h2.252.40E-03
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h2.121.08E-03
GSE2169Col, WT, waterCol, WT, chitin 30 min-2.262.76E-04
GSE2169Col, rre1, waterCol, rre1, chitin 30 min-1.511.26E-02
GSE2169Col, rre2, waterCol, rre2, chitin 30 min-1.772.73E-03
GSE21920Col, WT, mockCol, WT, Pto HopZ1a C216aA 6 h1.534.65E-03
GSE26679Col, WT, GC 0 hCol, WT, GC 96 h1.541.45E-05
GSE37269Di2, WT, controlDi2, WT, TEV 21 d-1.731.13E-02
GSE37269Oy0, WT, controlOy0, WT, TEV 21 d-1.863.92E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.392.06E-05
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.852.50E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.574.78E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h1.967.45E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h2.122.12E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h2.219.95E-11
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.424.17E-06
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h2.442.47E-03
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h-2.202.26E-05
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-2.241.59E-05
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h1.862.53E-02
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h3.176.49E-13
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h2.041.36E-06
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h2.079.91E-07
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h1.601.12E-04
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h1.613.22E-04
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h1.744.63E-05
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h2.012.90E-06
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h1.517.39E-03






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