gene detail

Gene description

TAIR ID: AT3G60220

Short description: TOXICOS EN LEVADURA 4

Pathogen responsiveness: -2.14

General responsiveness: -1.68

Orthologous

Rice: No orthologous gene

Maize:

Wheat: No orthologous gene

GO biological process

proteasome-mediated ubiquitin-dependent protein catabolic process, protein ubiquitination

GO cellular component

integral component of membrane, nucleus

GO molecular function

ubiquitin-protein transferase activity, metal ion binding, ubiquitin protein ligase activity

Protein domain

Pfam	PF13639, Ring finger domain
SMART	SM00184, RING

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT1G24260

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 5

Coexpression network

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.51	9.57E-03
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-1.51	6.77E-12
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	-1.53	8.88E-04