gene detail

Gene description

TAIR ID: AT3G56950

Short description: small and basic intrinsic protein 2;1

Pathogen responsiveness: -1.81

General responsiveness: -0.26

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G175038

Wheat: No orthologous gene

GO biological process

ion transmembrane transport, transport

GO cellular component

integral component of membrane, endoplasmic reticulum membrane, integral component of plasma membrane, plasma membrane, endoplasmic reticulum, membrane

GO molecular function

transporter activity, water channel activity

Protein domain

Pfam	PF00230, Major intrinsic protein

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G13450, AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 11 (Top20%)

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_EDS16_GO  view
GSE26679_EDR1_GC  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	1.69	8.09E-09
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	1.58	1.94E-10
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	1.73	4.97E-11