gene detail

Gene description

TAIR ID: AT3G56060

Short description: Glucose-methanol-choline (GMC) oxidoreductase family protein

Pathogen responsiveness: -0.56

General responsiveness: 0.91

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

oxidation-reduction process

GO cellular component

unkown

GO molecular function

flavin adenine dinucleotide binding, aldehyde-lyase activity, oxidoreductase activity, acting on CH-OH group of donors

Protein domain

Pfam	PF05199, GMC oxidoreductase
Pfam	PF00732, GMC oxidoreductase

Metabolic pathway

PWY-321: cutin biosynthesis
PWY-1121: suberin monomers biosynthesis

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G07100, AT3G24050, AT5G22570, AT2G46130

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

17 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE13739	Col, WT, control 0 h	Col, WT, G.orontii 6 h	-1.56	2.13E-04
GSE13739	Col, eds, control 0 h	Col, eds, G.orontii 6 h	-1.65	1.01E-04
GSE13739	Col, eds, control 7 d	Col, eds, G.orontii 7 d	-1.93	5.17E-06
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	-1.83	2.17E-07
GSE17464	Laer, control	Laer, PstDC3000 12 h	-1.60	4.77E-06
GSE17464	Penta, control	Penta, Alternaria brassicicola 3 d	-2.00	1.83E-08
GSE17464	Penta, control	Penta, PstDC3000 12 h	-2.17	2.03E-09
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-1.94	9.66E-08
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-3.25	5.72E-05
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.80	1.40E-02
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-2.28	2.39E-14
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-1.82	7.72E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-1.57	3.87E-12
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_24 h	1.66	8.03E-05
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_24 h	1.76	3.69E-05
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-1.63	9.13E-04
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-2.24	2.27E-03