Gene: AT3G54640
     

Gene description


TAIR ID: AT3G54640

Short description: tryptophan synthase alpha chain

Pathogen responsiveness: 1.23

General responsiveness: -0.62

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


tryptophan biosynthetic process, auxin biosynthetic process, defense response by callose deposition in cell wall, defense response to bacterium, gravitropism, response to cytokinin


GO cellular component


chloroplast, chloroplast stroma


GO molecular function


tryptophan synthase activity, indole-3-glycerol-phosphate lyase activity


Protein domain


PfamPF00290, Tryptophan synthase alpha chain

Transcriptional regulation


Regulator:
AT5G07100, AT5G22570, AT2G46130

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


55 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE11807Col, WT, water 4 hCol, WT, Flg22 4 h3.222.25E-02
GSE12856Col, WT, controlCol, WT, Bg h2.955.92E-10
GSE12856Col, ataf1, controlCol, ataf1, Bg h3.132.62E-10
GSE13739Col, WT, control 0 hCol, WT, G.orontii 5 d1.623.01E-06
GSE13739Col, WT, control 7 dCol, WT, G.orontii 7 d2.272.07E-10
GSE13739Col, eds, control 7 dCol, eds, G.orontii 7 d2.561.62E-11
GSE17464Laer, controlLaer, Flg22 2 h1.843.67E-04
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h1.572.58E-03
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h2.395.85E-05
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h2.013.48E-04
GSE18329Col, WT, controlCol, WT, Hpa noco2 96 h1.838.03E-13
GSE18329Col, wrky72_1, controlCol, wrky72_1, Hpa noco2 96 h2.143.14E-14
GSE18329Col, wrky72_1, controlCol, wrky72_2, Hpa noco2 96 h2.377.38E-15
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h2.116.33E-06
GSE26206Col, WT, controlCol, WT, R.solani_AG2_1 7 d1.773.13E-05
GSE26206Col, WT, controlCol, WT, R.solani_AG8 7 d1.543.89E-05
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.337.03E-13
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.905.37E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h1.661.20E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h4.075.41E-16
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.641.68E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h3.562.40E-15
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.538.81E-10
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.091.17E-11
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.384.62E-13
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h4.341.34E-07
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h3.861.93E-07
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h2.042.67E-09
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h2.002.84E-09
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h1.991.71E-06
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h2.391.20E-07
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h2.244.44E-07
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h2.591.85E-09
GSE56094Col, WT, control 12 hCol, WT, hrpA- 12 h1.538.40E-04
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h2.191.69E-07
GSE56094Col, WT, control 13 hCol, WT, hrpA- 13 h1.865.25E-05
GSE56094Col, WT, control 6 hCol, WT, hrpA- 6 h1.741.85E-04
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h1.795.76E-05
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h1.547.25E-04
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h1.582.10E-04
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h2.235.80E-07
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h1.861.27E-05
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h1.961.14E-05
GSE5615Col, WT, GST 4 hCol, WT, GST+NPP1 4 h1.617.41E-04
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h1.991.78E-05
GSE5616Col, WT, water 12 hCol, WT, P. infestans 12 h3.637.28E-10
GSE5616Col, WT, water 24 hCol, WT, P. infestans 24 h2.152.53E-07
GSE5616Col, WT, water 6 hCol, WT, P. infestans 6 h3.905.74E-11
GSE5686Col, WT, control 5 dCol, WT, G.orontii 5 d2.003.74E-10
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h1.561.53E-03
GSE62537Col, WT, control 48 hCol, WT, V.longisporum 48 h1.681.17E-02
GSE62537Col, ndr1, control 48 hCol, ndr1, V.longisporum 48 h1.718.54E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h1.794.85E-05
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h3.122.87E-06
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h3.064.42E-06






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