gene detail

Gene description

TAIR ID: AT3G54430

Short description: SHI-related sequence 6

Pathogen responsiveness: -2.32

General responsiveness: -2.94

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

multicellular organism development, auxin biosynthetic process, auxin-activated signaling pathway

GO cellular component

chloroplast

GO molecular function

DNA binding, protein binding, metal ion binding

Protein domain

Pfam	PF05142, Domain of unknown function (DUF702)

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G51600, AT1G24260, AT4G31800

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

Coexpression network

GSE26679_WT_GC view
GSE13739_EDS16_GO view

Differentially expressed condition

2 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-2.15	1.99E-03
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.61	1.21E-02