gene detail

Gene description

TAIR ID: AT3G54200

Short description: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

Pathogen responsiveness: -1.25

General responsiveness: -1.46

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G094589

Wheat: No orthologous gene

GO biological process

biological_process

GO cellular component

plasma membrane, anchored component of plasma membrane, integral component of membrane, plasmodesma, nucleus

GO molecular function

molecular_function

Protein domain

Pfam	PF03168, Late embryogenesis abundant protein

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT2G43010

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

click to view PPI network

Coexpression network

GSE56094_WT_HRPA-  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Penta, control	Penta, Flg22 2 h	1.51	1.21E-04
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.99	1.54E-04
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	-1.74	1.36E-02