co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G54200

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010046: response to mycotoxin	0.00E+00
2	GO:1905499: trichome papilla formation	0.00E+00
3	GO:0019593: mannitol biosynthetic process	0.00E+00
4	GO:0007141: male meiosis I	0.00E+00
5	GO:0042335: cuticle development	3.92E-07
6	GO:0010200: response to chitin	1.98E-06
7	GO:0010025: wax biosynthetic process	6.25E-06
8	GO:0009873: ethylene-activated signaling pathway	1.17E-05
9	GO:0006665: sphingolipid metabolic process	1.24E-05
10	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	3.66E-05
11	GO:0080051: cutin transport	8.96E-05
12	GO:0033481: galacturonate biosynthetic process	8.96E-05
13	GO:0009609: response to symbiotic bacterium	8.96E-05
14	GO:0006631: fatty acid metabolic process	1.66E-04
15	GO:0010143: cutin biosynthetic process	1.97E-04
16	GO:0015709: thiosulfate transport	2.12E-04
17	GO:0071422: succinate transmembrane transport	2.12E-04
18	GO:0031407: oxylipin metabolic process	2.12E-04
19	GO:0010289: homogalacturonan biosynthetic process	2.12E-04
20	GO:2000030: regulation of response to red or far red light	2.12E-04
21	GO:0015908: fatty acid transport	2.12E-04
22	GO:0010325: raffinose family oligosaccharide biosynthetic process	3.54E-04
23	GO:0010091: trichome branching	4.38E-04
24	GO:0015729: oxaloacetate transport	5.10E-04
25	GO:0030100: regulation of endocytosis	5.10E-04
26	GO:0009694: jasmonic acid metabolic process	6.78E-04
27	GO:0010222: stem vascular tissue pattern formation	6.78E-04
28	GO:0006536: glutamate metabolic process	6.78E-04
29	GO:0006633: fatty acid biosynthetic process	7.81E-04
30	GO:0009737: response to abscisic acid	7.84E-04
31	GO:0071423: malate transmembrane transport	8.59E-04
32	GO:0048232: male gamete generation	1.05E-03
33	GO:0035435: phosphate ion transmembrane transport	1.05E-03
34	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	1.25E-03
35	GO:0010555: response to mannitol	1.25E-03
36	GO:0009611: response to wounding	1.32E-03
37	GO:1902074: response to salt	1.46E-03
38	GO:0030497: fatty acid elongation	1.46E-03
39	GO:0008272: sulfate transport	1.46E-03
40	GO:0050829: defense response to Gram-negative bacterium	1.46E-03
41	GO:2000070: regulation of response to water deprivation	1.69E-03
42	GO:0007155: cell adhesion	1.69E-03
43	GO:1900150: regulation of defense response to fungus	1.69E-03
44	GO:0009827: plant-type cell wall modification	1.93E-03
45	GO:0098656: anion transmembrane transport	2.18E-03
46	GO:0042761: very long-chain fatty acid biosynthetic process	2.43E-03
47	GO:2000280: regulation of root development	2.43E-03
48	GO:0051026: chiasma assembly	2.70E-03
49	GO:0000038: very long-chain fatty acid metabolic process	2.98E-03
50	GO:0071365: cellular response to auxin stimulus	3.26E-03
51	GO:0010105: negative regulation of ethylene-activated signaling pathway	3.26E-03
52	GO:0005986: sucrose biosynthetic process	3.56E-03
53	GO:0010588: cotyledon vascular tissue pattern formation	3.56E-03
54	GO:0042545: cell wall modification	3.68E-03
55	GO:0070588: calcium ion transmembrane transport	4.18E-03
56	GO:0009225: nucleotide-sugar metabolic process	4.18E-03
57	GO:2000377: regulation of reactive oxygen species metabolic process	4.83E-03
58	GO:0009863: salicylic acid mediated signaling pathway	4.83E-03
59	GO:0009269: response to desiccation	5.52E-03
60	GO:0031408: oxylipin biosynthetic process	5.52E-03
61	GO:0031348: negative regulation of defense response	5.87E-03
62	GO:0007131: reciprocal meiotic recombination	5.87E-03
63	GO:0045490: pectin catabolic process	6.52E-03
64	GO:0010150: leaf senescence	6.52E-03
65	GO:0019722: calcium-mediated signaling	6.61E-03
66	GO:0009741: response to brassinosteroid	7.77E-03
67	GO:0045489: pectin biosynthetic process	7.77E-03
68	GO:0008654: phospholipid biosynthetic process	8.58E-03
69	GO:0010193: response to ozone	8.99E-03
70	GO:0000302: response to reactive oxygen species	8.99E-03
71	GO:0006310: DNA recombination	1.03E-02
72	GO:0007267: cell-cell signaling	1.07E-02
73	GO:0009627: systemic acquired resistance	1.26E-02
74	GO:0030244: cellulose biosynthetic process	1.41E-02
75	GO:0010311: lateral root formation	1.46E-02
76	GO:0009834: plant-type secondary cell wall biogenesis	1.51E-02
77	GO:0006811: ion transport	1.51E-02
78	GO:0045892: negative regulation of transcription, DNA-templated	1.53E-02
79	GO:0009910: negative regulation of flower development	1.56E-02
80	GO:0048527: lateral root development	1.56E-02
81	GO:0010119: regulation of stomatal movement	1.56E-02
82	GO:0009414: response to water deprivation	1.58E-02
83	GO:0006952: defense response	1.62E-02
84	GO:0006869: lipid transport	1.65E-02
85	GO:0006839: mitochondrial transport	1.82E-02
86	GO:0009751: response to salicylic acid	1.83E-02
87	GO:0006897: endocytosis	1.88E-02
88	GO:0009640: photomorphogenesis	1.99E-02
89	GO:0006260: DNA replication	2.28E-02
90	GO:0009651: response to salt stress	2.31E-02
91	GO:0042538: hyperosmotic salinity response	2.34E-02
92	GO:0009409: response to cold	2.39E-02
93	GO:0009585: red, far-red light phototransduction	2.46E-02
94	GO:0010224: response to UV-B	2.52E-02
95	GO:0006857: oligopeptide transport	2.58E-02
96	GO:0005975: carbohydrate metabolic process	2.76E-02
97	GO:0043086: negative regulation of catalytic activity	2.77E-02
98	GO:0048367: shoot system development	2.84E-02
99	GO:0009620: response to fungus	2.96E-02
100	GO:0009624: response to nematode	3.16E-02
101	GO:0009416: response to light stimulus	3.29E-02
102	GO:0009742: brassinosteroid mediated signaling pathway	3.30E-02
103	GO:0006457: protein folding	4.25E-02
104	GO:0007623: circadian rhythm	4.67E-02

Rank	GO Term	Adjusted P value
1	GO:0080123: jasmonate-amino synthetase activity	0.00E+00
2	GO:0070566: adenylyltransferase activity	0.00E+00
3	GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity	0.00E+00
4	GO:0009922: fatty acid elongase activity	4.48E-08
5	GO:0070330: aromatase activity	1.64E-06
6	GO:0018685: alkane 1-monooxygenase activity	1.24E-05
7	GO:0015245: fatty acid transporter activity	8.96E-05
8	GO:0031957: very long-chain fatty acid-CoA ligase activity	8.96E-05
9	GO:0016629: 12-oxophytodienoate reductase activity	2.12E-04
10	GO:0017040: ceramidase activity	2.12E-04
11	GO:0015117: thiosulfate transmembrane transporter activity	2.12E-04
12	GO:1901677: phosphate transmembrane transporter activity	2.12E-04
13	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	2.49E-04
14	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	2.49E-04
15	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	2.49E-04
16	GO:0005310: dicarboxylic acid transmembrane transporter activity	3.54E-04
17	GO:0015141: succinate transmembrane transporter activity	3.54E-04
18	GO:0047274: galactinol-sucrose galactosyltransferase activity	3.54E-04
19	GO:0004351: glutamate decarboxylase activity	5.10E-04
20	GO:0015131: oxaloacetate transmembrane transporter activity	5.10E-04
21	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	5.10E-04
22	GO:0050378: UDP-glucuronate 4-epimerase activity	6.78E-04
23	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	1.05E-03
24	GO:0102391: decanoate--CoA ligase activity	1.25E-03
25	GO:0004467: long-chain fatty acid-CoA ligase activity	1.46E-03
26	GO:0015140: malate transmembrane transporter activity	1.46E-03
27	GO:0019899: enzyme binding	1.46E-03
28	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	2.18E-03
29	GO:0045330: aspartyl esterase activity	2.96E-03
30	GO:0015116: sulfate transmembrane transporter activity	3.26E-03
31	GO:0005315: inorganic phosphate transmembrane transporter activity	3.56E-03
32	GO:0005262: calcium channel activity	3.56E-03
33	GO:0030599: pectinesterase activity	3.57E-03
34	GO:0016746: transferase activity, transferring acyl groups	3.90E-03
35	GO:0043565: sequence-specific DNA binding	4.39E-03
36	GO:0008514: organic anion transmembrane transporter activity	6.61E-03
37	GO:0010181: FMN binding	8.17E-03
38	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	8.29E-03
39	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	9.48E-03
40	GO:0016791: phosphatase activity	1.03E-02
41	GO:0016413: O-acetyltransferase activity	1.12E-02
42	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.36E-02
43	GO:0005096: GTPase activator activity	1.46E-02
44	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.56E-02
45	GO:0009055: electron carrier activity	1.99E-02
46	GO:0008289: lipid binding	2.58E-02
47	GO:0031625: ubiquitin protein ligase binding	2.65E-02
48	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.84E-02
49	GO:0003677: DNA binding	2.99E-02
50	GO:0003779: actin binding	3.10E-02
51	GO:0030170: pyridoxal phosphate binding	4.00E-02
52	GO:0015144: carbohydrate transmembrane transporter activity	4.22E-02
53	GO:0003700: transcription factor activity, sequence-specific DNA binding	4.27E-02
54	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.44E-02
55	GO:0046910: pectinesterase inhibitor activity	4.44E-02
56	GO:0015297: antiporter activity	4.51E-02
57	GO:0005351: sugar:proton symporter activity	4.59E-02
58	GO:0019825: oxygen binding	4.67E-02
59	GO:0005516: calmodulin binding	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0009923: fatty acid elongase complex	8.96E-05
2	GO:0046658: anchored component of plasma membrane	1.59E-04
3	GO:0016021: integral component of membrane	1.93E-04
4	GO:0009897: external side of plasma membrane	3.54E-04
5	GO:0009505: plant-type cell wall	1.21E-03
6	GO:0016604: nuclear body	2.43E-03
7	GO:0031225: anchored component of membrane	2.51E-03
8	GO:0005743: mitochondrial inner membrane	2.94E-03
9	GO:0005768: endosome	3.18E-03
10	GO:0000790: nuclear chromatin	6.99E-03
11	GO:0005618: cell wall	9.10E-03
12	GO:0032580: Golgi cisterna membrane	1.03E-02
13	GO:0005802: trans-Golgi network	1.21E-02
14	GO:0005576: extracellular region	1.95E-02
15	GO:0005886: plasma membrane	2.44E-02
16	GO:0048046: apoplast	2.61E-02
17	GO:0009506: plasmodesma	2.73E-02