Gene: AT3G53460
Gene description
TAIR ID: AT3G53460
Short description: chloroplast RNA-binding protein 29
Pathogen responsiveness: 0.11
General responsiveness: 0.59
Orthologous
Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene
GO biological process
RNA stabilization, RNA splicing, mRNA processing, cold acclimation, response to cold, RNA processing
GO cellular component
chloroplast stroma, chloroplast, chloroplast thylakoid, thylakoid, intracellular ribonucleoprotein complex
GO molecular function
RNA binding
Metabolic pathway
Not involved in metabolic pathway
KEGG pathway
Not involved in KEGG pathway
click to view PPI networkCoexpression network
Differentially expressed condition 
16 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE17464 | Laer, control | Laer, Alternaria brassicicola 3 d | 2.90 | 2.31E-06 |
| GSE17464 | Laer, control | Laer, PstDC3000 12 h | 2.33 | 1.28E-04 |
| GSE17464 | Penta, control | Penta, Alternaria brassicicola 3 d | 2.31 | 1.16E-04 |
| GSE17464 | Penta, control | Penta, PstDC3000 12 h | 2.43 | 4.81E-05 |
| GSE17500 | Col, 35S:AFB1, control 0 h | Col, 35S:AFB1, PstDC3000 24 h | -1.89 | 7.44E-05 |
| GSE17500 | Col, WT, control 0 h | Col, WT, PstDC3000 24 h | -2.63 | 2.50E-06 |
| GSE17500 | Col, miR393, control 0 h | Col, miR393, PstDC3000 24 h | -2.14 | 2.29E-05 |
| GSE18978 | Col, WT, control 24 h | Col, WT, PsmES4326 24 h | -3.82 | 7.54E-12 |
| GSE21920 | Col, WT, mock | Col, WT, Pto HopZ1a 6 h | -1.71 | 1.90E-05 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 12 h | -2.48 | 3.33E-12 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 4 h | -1.51 | 1.18E-08 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 8 h | -1.63 | 1.86E-09 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 12 h | -1.51 | 4.97E-09 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | -1.55 | 3.69E-09 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 8 h | -1.77 | 4.26E-10 |
| GSE45214 | Col, med16, PstDC3000 AvrRpt2 0 h | Col, med16, PstDC3000 AvrRpt2 4 h | -2.59 | 9.64E-14 |
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