GO Enrichment Analysis of Co-expressed Genes with
AT3G53460
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000372: Group I intron splicing | 0.00E+00 |
| 2 | GO:0032212: positive regulation of telomere maintenance via telomerase | 0.00E+00 |
| 3 | GO:0032206: positive regulation of telomere maintenance | 0.00E+00 |
| 4 | GO:0006437: tyrosyl-tRNA aminoacylation | 0.00E+00 |
| 5 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 6 | GO:0009090: homoserine biosynthetic process | 9.14E-05 |
| 7 | GO:0043087: regulation of GTPase activity | 9.14E-05 |
| 8 | GO:0006436: tryptophanyl-tRNA aminoacylation | 9.14E-05 |
| 9 | GO:0048363: mucilage pectin metabolic process | 9.14E-05 |
| 10 | GO:0071668: plant-type cell wall assembly | 2.16E-04 |
| 11 | GO:0043039: tRNA aminoacylation | 2.16E-04 |
| 12 | GO:0006418: tRNA aminoacylation for protein translation | 3.15E-04 |
| 13 | GO:0045910: negative regulation of DNA recombination | 3.61E-04 |
| 14 | GO:0009067: aspartate family amino acid biosynthetic process | 5.20E-04 |
| 15 | GO:0051639: actin filament network formation | 5.20E-04 |
| 16 | GO:0010239: chloroplast mRNA processing | 5.20E-04 |
| 17 | GO:0051764: actin crosslink formation | 6.90E-04 |
| 18 | GO:0080110: sporopollenin biosynthetic process | 8.73E-04 |
| 19 | GO:0010158: abaxial cell fate specification | 8.73E-04 |
| 20 | GO:0009793: embryo development ending in seed dormancy | 9.72E-04 |
| 21 | GO:0016554: cytidine to uridine editing | 1.07E-03 |
| 22 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 1.07E-03 |
| 23 | GO:0009088: threonine biosynthetic process | 1.27E-03 |
| 24 | GO:0010098: suspensor development | 1.49E-03 |
| 25 | GO:0010050: vegetative phase change | 1.49E-03 |
| 26 | GO:0009850: auxin metabolic process | 1.72E-03 |
| 27 | GO:0070413: trehalose metabolism in response to stress | 1.72E-03 |
| 28 | GO:0019430: removal of superoxide radicals | 1.96E-03 |
| 29 | GO:0071482: cellular response to light stimulus | 1.96E-03 |
| 30 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.13E-03 |
| 31 | GO:0000373: Group II intron splicing | 2.21E-03 |
| 32 | GO:0000723: telomere maintenance | 2.48E-03 |
| 33 | GO:0009086: methionine biosynthetic process | 2.48E-03 |
| 34 | GO:1900865: chloroplast RNA modification | 2.48E-03 |
| 35 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 2.48E-03 |
| 36 | GO:0006535: cysteine biosynthetic process from serine | 2.75E-03 |
| 37 | GO:0006298: mismatch repair | 2.75E-03 |
| 38 | GO:0006259: DNA metabolic process | 2.75E-03 |
| 39 | GO:0010192: mucilage biosynthetic process | 2.75E-03 |
| 40 | GO:0006265: DNA topological change | 3.03E-03 |
| 41 | GO:0009089: lysine biosynthetic process via diaminopimelate | 3.03E-03 |
| 42 | GO:0010582: floral meristem determinacy | 3.32E-03 |
| 43 | GO:0009833: plant-type primary cell wall biogenesis | 4.58E-03 |
| 44 | GO:0051017: actin filament bundle assembly | 4.92E-03 |
| 45 | GO:0006289: nucleotide-excision repair | 4.92E-03 |
| 46 | GO:0005992: trehalose biosynthetic process | 4.92E-03 |
| 47 | GO:0019344: cysteine biosynthetic process | 4.92E-03 |
| 48 | GO:0015992: proton transport | 5.62E-03 |
| 49 | GO:0045490: pectin catabolic process | 6.70E-03 |
| 50 | GO:0010584: pollen exine formation | 6.73E-03 |
| 51 | GO:0006284: base-excision repair | 6.73E-03 |
| 52 | GO:0009451: RNA modification | 6.85E-03 |
| 53 | GO:0016117: carotenoid biosynthetic process | 7.11E-03 |
| 54 | GO:0000271: polysaccharide biosynthetic process | 7.51E-03 |
| 55 | GO:0009958: positive gravitropism | 7.91E-03 |
| 56 | GO:0045489: pectin biosynthetic process | 7.91E-03 |
| 57 | GO:0007059: chromosome segregation | 8.32E-03 |
| 58 | GO:0010583: response to cyclopentenone | 9.60E-03 |
| 59 | GO:0009658: chloroplast organization | 1.04E-02 |
| 60 | GO:0048481: plant ovule development | 1.43E-02 |
| 61 | GO:0030244: cellulose biosynthetic process | 1.43E-02 |
| 62 | GO:0009832: plant-type cell wall biogenesis | 1.48E-02 |
| 63 | GO:0045892: negative regulation of transcription, DNA-templated | 1.57E-02 |
| 64 | GO:0016051: carbohydrate biosynthetic process | 1.69E-02 |
| 65 | GO:0009965: leaf morphogenesis | 2.20E-02 |
| 66 | GO:0006855: drug transmembrane transport | 2.26E-02 |
| 67 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.57E-02 |
| 68 | GO:0048316: seed development | 2.89E-02 |
| 69 | GO:0009624: response to nematode | 3.22E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 9.14E-05 |
| 2 | GO:0004830: tryptophan-tRNA ligase activity | 9.14E-05 |
| 3 | GO:0004831: tyrosine-tRNA ligase activity | 9.14E-05 |
| 4 | GO:0050017: L-3-cyanoalanine synthase activity | 2.16E-04 |
| 5 | GO:0008805: carbon-monoxide oxygenase activity | 2.16E-04 |
| 6 | GO:0004412: homoserine dehydrogenase activity | 2.16E-04 |
| 7 | GO:0003723: RNA binding | 3.42E-04 |
| 8 | GO:0030570: pectate lyase activity | 4.15E-04 |
| 9 | GO:0004812: aminoacyl-tRNA ligase activity | 4.87E-04 |
| 10 | GO:0043047: single-stranded telomeric DNA binding | 5.20E-04 |
| 11 | GO:0009678: hydrogen-translocating pyrophosphatase activity | 5.20E-04 |
| 12 | GO:0017172: cysteine dioxygenase activity | 5.20E-04 |
| 13 | GO:0001872: (1->3)-beta-D-glucan binding | 5.20E-04 |
| 14 | GO:0004072: aspartate kinase activity | 5.20E-04 |
| 15 | GO:0004519: endonuclease activity | 6.41E-04 |
| 16 | GO:0070628: proteasome binding | 6.90E-04 |
| 17 | GO:0003684: damaged DNA binding | 8.34E-04 |
| 18 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 8.73E-04 |
| 19 | GO:0008725: DNA-3-methyladenine glycosylase activity | 8.73E-04 |
| 20 | GO:0031593: polyubiquitin binding | 1.07E-03 |
| 21 | GO:0030983: mismatched DNA binding | 1.07E-03 |
| 22 | GO:0004784: superoxide dismutase activity | 1.07E-03 |
| 23 | GO:0004656: procollagen-proline 4-dioxygenase activity | 1.27E-03 |
| 24 | GO:0004124: cysteine synthase activity | 1.27E-03 |
| 25 | GO:0042162: telomeric DNA binding | 1.49E-03 |
| 26 | GO:0004427: inorganic diphosphatase activity | 1.49E-03 |
| 27 | GO:0003746: translation elongation factor activity | 1.60E-03 |
| 28 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 1.96E-03 |
| 29 | GO:0004805: trehalose-phosphatase activity | 2.75E-03 |
| 30 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 3.03E-03 |
| 31 | GO:0008061: chitin binding | 4.26E-03 |
| 32 | GO:0031418: L-ascorbic acid binding | 4.92E-03 |
| 33 | GO:0043130: ubiquitin binding | 4.92E-03 |
| 34 | GO:0016829: lyase activity | 5.26E-03 |
| 35 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 5.98E-03 |
| 36 | GO:0016760: cellulose synthase (UDP-forming) activity | 6.35E-03 |
| 37 | GO:0008536: Ran GTPase binding | 7.91E-03 |
| 38 | GO:0050662: coenzyme binding | 8.32E-03 |
| 39 | GO:0010181: FMN binding | 8.32E-03 |
| 40 | GO:0051015: actin filament binding | 1.00E-02 |
| 41 | GO:0016759: cellulose synthase activity | 1.05E-02 |
| 42 | GO:0016791: phosphatase activity | 1.05E-02 |
| 43 | GO:0016597: amino acid binding | 1.14E-02 |
| 44 | GO:0030247: polysaccharide binding | 1.33E-02 |
| 45 | GO:0005096: GTPase activator activity | 1.48E-02 |
| 46 | GO:0015238: drug transmembrane transporter activity | 1.48E-02 |
| 47 | GO:0003697: single-stranded DNA binding | 1.69E-02 |
| 48 | GO:0050661: NADP binding | 1.86E-02 |
| 49 | GO:0004185: serine-type carboxypeptidase activity | 2.03E-02 |
| 50 | GO:0035091: phosphatidylinositol binding | 2.14E-02 |
| 51 | GO:0016491: oxidoreductase activity | 2.39E-02 |
| 52 | GO:0016757: transferase activity, transferring glycosyl groups | 2.46E-02 |
| 53 | GO:0008026: ATP-dependent helicase activity | 3.36E-02 |
| 54 | GO:0016758: transferase activity, transferring hexosyl groups | 3.71E-02 |
| 55 | GO:0019843: rRNA binding | 3.78E-02 |
| 56 | GO:0030170: pyridoxal phosphate binding | 4.07E-02 |
| 57 | GO:0016787: hydrolase activity | 4.36E-02 |
| 58 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 4.45E-02 |
| 59 | GO:0015297: antiporter activity | 4.60E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009537: proplastid | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 1.84E-05 |
| 3 | GO:0009513: etioplast | 2.16E-04 |
| 4 | GO:0005697: telomerase holoenzyme complex | 2.16E-04 |
| 5 | GO:0009509: chromoplast | 3.61E-04 |
| 6 | GO:0042646: plastid nucleoid | 5.20E-04 |
| 7 | GO:0032432: actin filament bundle | 5.20E-04 |
| 8 | GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing) | 6.90E-04 |
| 9 | GO:0009295: nucleoid | 8.83E-04 |
| 10 | GO:0009501: amyloplast | 1.72E-03 |
| 11 | GO:0000784: nuclear chromosome, telomeric region | 1.96E-03 |
| 12 | GO:0042644: chloroplast nucleoid | 2.21E-03 |
| 13 | GO:0009570: chloroplast stroma | 2.39E-03 |
| 14 | GO:0005884: actin filament | 3.03E-03 |
| 15 | GO:0009574: preprophase band | 3.63E-03 |
| 16 | GO:0009532: plastid stroma | 5.62E-03 |
| 17 | GO:0031965: nuclear membrane | 8.74E-03 |
| 18 | GO:0030529: intracellular ribonucleoprotein complex | 1.19E-02 |
| 19 | GO:0005886: plasma membrane | 1.47E-02 |
| 20 | GO:0005856: cytoskeleton | 2.20E-02 |
| 21 | GO:0005737: cytoplasm | 3.74E-02 |
| 22 | GO:0005759: mitochondrial matrix | 4.45E-02 |