Gene: AT3G53180
     

Gene description


TAIR ID: AT3G53180

Short description: glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases

Pathogen responsiveness: -0.28

General responsiveness: -1.17

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G115646  

Wheat: No orthologous gene

GO biological process


root cap development, response to bacterium, lateral root formation, nitrogen fixation, response to abscisic acid


GO cellular component


cytosol, cytoplasm


GO molecular function


glutamate-ammonia ligase activity


Protein domain


PfamPF04909, Amidohydrolase
PfamPF00120, Glutamine synthetase, catalytic domain
SMARTSM01230, Gln-synt_C

KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 8

click to view PPI network

Differentially expressed condition


18 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h1.852.37E-09
GSE12856Col, ataf1, controlCol, ataf1, Bg h1.624.87E-09
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.541.68E-02
GSE37269Wt1, WT, controlWt1, WT, TEV 21 d-1.593.37E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.932.47E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.571.11E-11
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.795.30E-11
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h2.082.46E-03
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h1.802.13E-11
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h1.908.64E-12
GSE56094Col, WT, control 5 hCol, WT, hrpA- 5 h1.801.29E-09
GSE5615Col, WT, water 4 hCol, WT, Flg22 4 h2.039.27E-11
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h1.805.71E-10
GSE5616Col, WT, water 6 hCol, WT, P. infestans 6 h1.552.78E-09
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h2.427.09E-04
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min2.212.89E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 2-4 h2.072.67E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min1.971.59E-03






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