co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G53180

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0052573: UDP-D-galactose metabolic process	0.00E+00
2	GO:1900067: regulation of cellular response to alkaline pH	0.00E+00
3	GO:0006862: nucleotide transport	0.00E+00
4	GO:2001142: nicotinate transport	0.00E+00
5	GO:0060416: response to growth hormone	0.00E+00
6	GO:0042353: fucose biosynthetic process	0.00E+00
7	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
8	GO:0010046: response to mycotoxin	0.00E+00
9	GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome	0.00E+00
10	GO:0009268: response to pH	0.00E+00
11	GO:0032499: detection of peptidoglycan	0.00E+00
12	GO:2001143: N-methylnicotinate transport	0.00E+00
13	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
14	GO:0046398: UDP-glucuronate metabolic process	0.00E+00
15	GO:0034263: positive regulation of autophagy in response to ER overload	0.00E+00
16	GO:0010200: response to chitin	9.96E-07
17	GO:0009611: response to wounding	3.81E-06
18	GO:0009699: phenylpropanoid biosynthetic process	7.15E-06
19	GO:0006468: protein phosphorylation	8.29E-06
20	GO:0002679: respiratory burst involved in defense response	2.34E-05
21	GO:0046777: protein autophosphorylation	1.07E-04
22	GO:0006955: immune response	1.80E-04
23	GO:0045010: actin nucleation	2.28E-04
24	GO:0007229: integrin-mediated signaling pathway	2.48E-04
25	GO:0080157: regulation of plant-type cell wall organization or biogenesis	2.48E-04
26	GO:0046244: salicylic acid catabolic process	2.48E-04
27	GO:0032491: detection of molecule of fungal origin	2.48E-04
28	GO:0009966: regulation of signal transduction	2.48E-04
29	GO:0051865: protein autoubiquitination	3.41E-04
30	GO:0010015: root morphogenesis	5.47E-04
31	GO:0010372: positive regulation of gibberellin biosynthetic process	5.49E-04
32	GO:2000030: regulation of response to red or far red light	5.49E-04
33	GO:0080148: negative regulation of response to water deprivation	5.49E-04
34	GO:0046939: nucleotide phosphorylation	5.49E-04
35	GO:0010155: regulation of proton transport	5.49E-04
36	GO:0042754: negative regulation of circadian rhythm	5.49E-04
37	GO:0046686: response to cadmium ion	7.14E-04
38	GO:0035556: intracellular signal transduction	8.29E-04
39	GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'	8.92E-04
40	GO:0080168: abscisic acid transport	8.92E-04
41	GO:0070475: rRNA base methylation	8.92E-04
42	GO:0010253: UDP-rhamnose biosynthetic process	8.92E-04
43	GO:0006081: cellular aldehyde metabolic process	8.92E-04
44	GO:0006011: UDP-glucose metabolic process	8.92E-04
45	GO:0000394: RNA splicing, via endonucleolytic cleavage and ligation	8.92E-04
46	GO:0009863: salicylic acid mediated signaling pathway	1.09E-03
47	GO:0009800: cinnamic acid biosynthetic process	1.27E-03
48	GO:0033014: tetrapyrrole biosynthetic process	1.27E-03
49	GO:0030100: regulation of endocytosis	1.27E-03
50	GO:0009226: nucleotide-sugar biosynthetic process	1.27E-03
51	GO:0048530: fruit morphogenesis	1.27E-03
52	GO:0071323: cellular response to chitin	1.27E-03
53	GO:0006986: response to unfolded protein	1.27E-03
54	GO:0006882: cellular zinc ion homeostasis	1.27E-03
55	GO:0009686: gibberellin biosynthetic process	1.57E-03
56	GO:0006536: glutamate metabolic process	1.70E-03
57	GO:0010107: potassium ion import	1.70E-03
58	GO:0061088: regulation of sequestering of zinc ion	1.70E-03
59	GO:0071219: cellular response to molecule of bacterial origin	1.70E-03
60	GO:0033356: UDP-L-arabinose metabolic process	1.70E-03
61	GO:0006749: glutathione metabolic process	1.70E-03
62	GO:1902347: response to strigolactone	1.70E-03
63	GO:0009694: jasmonic acid metabolic process	1.70E-03
64	GO:0015743: malate transport	1.70E-03
65	GO:0033320: UDP-D-xylose biosynthetic process	1.70E-03
66	GO:0010224: response to UV-B	1.73E-03
67	GO:0006090: pyruvate metabolic process	2.17E-03
68	GO:0030041: actin filament polymerization	2.17E-03
69	GO:0045487: gibberellin catabolic process	2.17E-03
70	GO:0048544: recognition of pollen	2.31E-03
71	GO:0080167: response to karrikin	2.58E-03
72	GO:0000470: maturation of LSU-rRNA	2.67E-03
73	GO:0042732: D-xylose metabolic process	2.67E-03
74	GO:0048317: seed morphogenesis	2.67E-03
75	GO:0006796: phosphate-containing compound metabolic process	2.67E-03
76	GO:0006559: L-phenylalanine catabolic process	2.67E-03
77	GO:0010337: regulation of salicylic acid metabolic process	2.67E-03
78	GO:0010256: endomembrane system organization	2.67E-03
79	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.71E-03
80	GO:0009555: pollen development	2.92E-03
81	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	3.21E-03
82	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	3.79E-03
83	GO:1900057: positive regulation of leaf senescence	3.79E-03
84	GO:0010038: response to metal ion	3.79E-03
85	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	3.79E-03
86	GO:0006401: RNA catabolic process	3.79E-03
87	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	4.03E-03
88	GO:0009816: defense response to bacterium, incompatible interaction	4.03E-03
89	GO:0006402: mRNA catabolic process	4.39E-03
90	GO:0009819: drought recovery	4.39E-03
91	GO:1900150: regulation of defense response to fungus	4.39E-03
92	GO:0009704: de-etiolation	4.39E-03
93	GO:2000070: regulation of response to water deprivation	4.39E-03
94	GO:0048658: anther wall tapetum development	4.39E-03
95	GO:0048193: Golgi vesicle transport	5.03E-03
96	GO:0006997: nucleus organization	5.03E-03
97	GO:0030968: endoplasmic reticulum unfolded protein response	5.03E-03
98	GO:0010208: pollen wall assembly	5.03E-03
99	GO:0009932: cell tip growth	5.03E-03
100	GO:0009753: response to jasmonic acid	5.19E-03
101	GO:0046685: response to arsenic-containing substance	5.70E-03
102	GO:0006783: heme biosynthetic process	5.70E-03
103	GO:0098656: anion transmembrane transport	5.70E-03
104	GO:0048527: lateral root development	5.75E-03
105	GO:0045087: innate immune response	6.30E-03
106	GO:0006779: porphyrin-containing compound biosynthetic process	6.40E-03
107	GO:0009086: methionine biosynthetic process	6.40E-03
108	GO:0008202: steroid metabolic process	6.40E-03
109	GO:0006782: protoporphyrinogen IX biosynthetic process	7.12E-03
110	GO:0019538: protein metabolic process	7.12E-03
111	GO:0010192: mucilage biosynthetic process	7.12E-03
112	GO:0015770: sucrose transport	7.88E-03
113	GO:1903507: negative regulation of nucleic acid-templated transcription	7.88E-03
114	GO:0006820: anion transport	8.66E-03
115	GO:0071365: cellular response to auxin stimulus	8.66E-03
116	GO:0009636: response to toxic substance	9.14E-03
117	GO:0006829: zinc II ion transport	9.47E-03
118	GO:0006108: malate metabolic process	9.47E-03
119	GO:0046274: lignin catabolic process	9.47E-03
120	GO:0018107: peptidyl-threonine phosphorylation	9.47E-03
121	GO:0055046: microgametogenesis	9.47E-03
122	GO:0009414: response to water deprivation	9.62E-03
123	GO:0006970: response to osmotic stress	9.99E-03
124	GO:0042742: defense response to bacterium	1.00E-02
125	GO:0006979: response to oxidative stress	1.02E-02
126	GO:0034605: cellular response to heat	1.03E-02
127	GO:0009225: nucleotide-sugar metabolic process	1.12E-02
128	GO:0005985: sucrose metabolic process	1.12E-02
129	GO:0071732: cellular response to nitric oxide	1.12E-02
130	GO:0046854: phosphatidylinositol phosphorylation	1.12E-02
131	GO:0009969: xyloglucan biosynthetic process	1.12E-02
132	GO:0009651: response to salt stress	1.20E-02
133	GO:2000377: regulation of reactive oxygen species metabolic process	1.30E-02
134	GO:0009737: response to abscisic acid	1.31E-02
135	GO:0009695: jasmonic acid biosynthetic process	1.39E-02
136	GO:0006952: defense response	1.43E-02
137	GO:0009620: response to fungus	1.43E-02
138	GO:0061077: chaperone-mediated protein folding	1.49E-02
139	GO:0016998: cell wall macromolecule catabolic process	1.49E-02
140	GO:0051260: protein homooligomerization	1.49E-02
141	GO:0009624: response to nematode	1.57E-02
142	GO:0030245: cellulose catabolic process	1.59E-02
143	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.59E-02
144	GO:0030433: ubiquitin-dependent ERAD pathway	1.59E-02
145	GO:0031348: negative regulation of defense response	1.59E-02
146	GO:0018105: peptidyl-serine phosphorylation	1.61E-02
147	GO:0071215: cellular response to abscisic acid stimulus	1.69E-02
148	GO:0071369: cellular response to ethylene stimulus	1.69E-02
149	GO:0016310: phosphorylation	1.72E-02
150	GO:0006817: phosphate ion transport	1.79E-02
151	GO:0019722: calcium-mediated signaling	1.79E-02
152	GO:0009306: protein secretion	1.79E-02
153	GO:0010214: seed coat development	1.79E-02
154	GO:0009408: response to heat	1.96E-02
155	GO:0042631: cellular response to water deprivation	2.01E-02
156	GO:0000271: polysaccharide biosynthetic process	2.01E-02
157	GO:0010118: stomatal movement	2.01E-02
158	GO:0006397: mRNA processing	2.07E-02
159	GO:0009960: endosperm development	2.12E-02
160	GO:0009958: positive gravitropism	2.12E-02
161	GO:0045489: pectin biosynthetic process	2.12E-02
162	GO:0009845: seed germination	2.13E-02
163	GO:0009749: response to glucose	2.34E-02
164	GO:0010193: response to ozone	2.46E-02
165	GO:0031047: gene silencing by RNA	2.58E-02
166	GO:0071281: cellular response to iron ion	2.70E-02
167	GO:0010090: trichome morphogenesis	2.70E-02
168	GO:1901657: glycosyl compound metabolic process	2.70E-02
169	GO:0007623: circadian rhythm	2.71E-02
170	GO:0009639: response to red or far red light	2.82E-02
171	GO:0006914: autophagy	2.82E-02
172	GO:0007166: cell surface receptor signaling pathway	3.10E-02
173	GO:0001666: response to hypoxia	3.19E-02
174	GO:0009615: response to virus	3.19E-02
175	GO:0009627: systemic acquired resistance	3.46E-02
176	GO:0015995: chlorophyll biosynthetic process	3.59E-02
177	GO:0048573: photoperiodism, flowering	3.59E-02
178	GO:0009738: abscisic acid-activated signaling pathway	3.84E-02
179	GO:0009817: defense response to fungus, incompatible interaction	3.86E-02
180	GO:0008219: cell death	3.86E-02
181	GO:0006499: N-terminal protein myristoylation	4.14E-02
182	GO:0009407: toxin catabolic process	4.14E-02
183	GO:0006811: ion transport	4.14E-02
184	GO:0010119: regulation of stomatal movement	4.28E-02
185	GO:0010043: response to zinc ion	4.28E-02
186	GO:0006865: amino acid transport	4.42E-02
187	GO:0009867: jasmonic acid mediated signaling pathway	4.56E-02
188	GO:0016051: carbohydrate biosynthetic process	4.56E-02
189	GO:0009409: response to cold	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0015215: nucleotide transmembrane transporter activity	0.00E+00
2	GO:0010491: UTP:arabinose-1-phosphate uridylyltransferase activity	0.00E+00
3	GO:0070566: adenylyltransferase activity	0.00E+00
4	GO:0033721: aldehyde dehydrogenase (NADP+) activity	0.00E+00
5	GO:0005522: profilin binding	0.00E+00
6	GO:0051748: UTP-monosaccharide-1-phosphate uridylyltransferase activity	0.00E+00
7	GO:0017103: UTP:galactose-1-phosphate uridylyltransferase activity	0.00E+00
8	GO:0047734: CDP-glycerol diphosphatase activity	0.00E+00
9	GO:0047338: UTP:xylose-1-phosphate uridylyltransferase activity	0.00E+00
10	GO:2001080: chitosan binding	0.00E+00
11	GO:0047350: glucuronate-1-phosphate uridylyltransferase activity	0.00E+00
12	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
13	GO:0080123: jasmonate-amino synthetase activity	0.00E+00
14	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
15	GO:0090416: nicotinate transporter activity	0.00E+00
16	GO:0010857: calcium-dependent protein kinase activity	0.00E+00
17	GO:0004674: protein serine/threonine kinase activity	2.85E-06
18	GO:0016301: kinase activity	3.99E-06
19	GO:0005524: ATP binding	2.24E-05
20	GO:0004672: protein kinase activity	1.69E-04
21	GO:0010489: UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity	2.48E-04
22	GO:0010490: UDP-4-keto-rhamnose-4-keto-reductase activity	2.48E-04
23	GO:0047150: betaine-homocysteine S-methyltransferase activity	2.48E-04
24	GO:0090440: abscisic acid transporter activity	2.48E-04
25	GO:0009383: rRNA (cytosine-C5-)-methyltransferase activity	2.48E-04
26	GO:0050377: UDP-glucose 4,6-dehydratase activity	5.49E-04
27	GO:0004103: choline kinase activity	5.49E-04
28	GO:0008883: glutamyl-tRNA reductase activity	5.49E-04
29	GO:0008460: dTDP-glucose 4,6-dehydratase activity	5.49E-04
30	GO:0008898: S-adenosylmethionine-homocysteine S-methyltransferase activity	5.49E-04
31	GO:0010280: UDP-L-rhamnose synthase activity	5.49E-04
32	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	7.44E-04
33	GO:0045548: phenylalanine ammonia-lyase activity	8.92E-04
34	GO:0046423: allene-oxide cyclase activity	8.92E-04
35	GO:0004383: guanylate cyclase activity	8.92E-04
36	GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity	8.92E-04
37	GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity	8.92E-04
38	GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity	8.92E-04
39	GO:0019201: nucleotide kinase activity	1.27E-03
40	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	1.27E-03
41	GO:0001653: peptide receptor activity	1.27E-03
42	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	1.27E-03
43	GO:0004351: glutamate decarboxylase activity	1.27E-03
44	GO:0004540: ribonuclease activity	1.32E-03
45	GO:0004470: malic enzyme activity	1.70E-03
46	GO:0019199: transmembrane receptor protein kinase activity	1.70E-03
47	GO:0005253: anion channel activity	1.70E-03
48	GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor	1.70E-03
49	GO:0004659: prenyltransferase activity	1.70E-03
50	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	1.70E-03
51	GO:0008948: oxaloacetate decarboxylase activity	2.17E-03
52	GO:0018685: alkane 1-monooxygenase activity	2.17E-03
53	GO:0047631: ADP-ribose diphosphatase activity	2.17E-03
54	GO:0002020: protease binding	2.17E-03
55	GO:0008381: mechanically-gated ion channel activity	2.17E-03
56	GO:0003779: actin binding	2.50E-03
57	GO:0004029: aldehyde dehydrogenase (NAD) activity	2.67E-03
58	GO:0035673: oligopeptide transmembrane transporter activity	2.67E-03
59	GO:0048040: UDP-glucuronate decarboxylase activity	2.67E-03
60	GO:0004017: adenylate kinase activity	3.21E-03
61	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	3.21E-03
62	GO:0019900: kinase binding	3.21E-03
63	GO:0070403: NAD+ binding	3.21E-03
64	GO:0008506: sucrose:proton symporter activity	3.79E-03
65	GO:0102425: myricetin 3-O-glucosyltransferase activity	3.79E-03
66	GO:0102360: daphnetin 3-O-glucosyltransferase activity	3.79E-03
67	GO:0004427: inorganic diphosphatase activity	3.79E-03
68	GO:0016621: cinnamoyl-CoA reductase activity	3.79E-03
69	GO:0015140: malate transmembrane transporter activity	3.79E-03
70	GO:0019899: enzyme binding	3.79E-03
71	GO:0015103: inorganic anion transmembrane transporter activity	3.79E-03
72	GO:0008143: poly(A) binding	3.79E-03
73	GO:0004143: diacylglycerol kinase activity	3.79E-03
74	GO:0015144: carbohydrate transmembrane transporter activity	4.35E-03
75	GO:0047893: flavonol 3-O-glucosyltransferase activity	4.39E-03
76	GO:0004430: 1-phosphatidylinositol 4-kinase activity	5.03E-03
77	GO:0003951: NAD+ kinase activity	5.03E-03
78	GO:0008142: oxysterol binding	5.03E-03
79	GO:0005351: sugar:proton symporter activity	5.06E-03
80	GO:0016207: 4-coumarate-CoA ligase activity	5.70E-03
81	GO:0047617: acyl-CoA hydrolase activity	6.40E-03
82	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	6.40E-03
83	GO:0004712: protein serine/threonine/tyrosine kinase activity	6.88E-03
84	GO:0008515: sucrose transmembrane transporter activity	7.88E-03
85	GO:0004521: endoribonuclease activity	8.66E-03
86	GO:0015198: oligopeptide transporter activity	8.66E-03
87	GO:0000175: 3'-5'-exoribonuclease activity	9.47E-03
88	GO:0005315: inorganic phosphate transmembrane transporter activity	9.47E-03
89	GO:0019888: protein phosphatase regulator activity	9.47E-03
90	GO:0050660: flavin adenine dinucleotide binding	1.09E-02
91	GO:0008061: chitin binding	1.12E-02
92	GO:0003714: transcription corepressor activity	1.30E-02
93	GO:0005385: zinc ion transmembrane transporter activity	1.30E-02
94	GO:0051087: chaperone binding	1.39E-02
95	GO:0035251: UDP-glucosyltransferase activity	1.49E-02
96	GO:0004707: MAP kinase activity	1.49E-02
97	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.59E-02
98	GO:0022891: substrate-specific transmembrane transporter activity	1.69E-02
99	GO:0004842: ubiquitin-protein transferase activity	1.75E-02
100	GO:0008514: organic anion transmembrane transporter activity	1.79E-02
101	GO:0016758: transferase activity, transferring hexosyl groups	1.91E-02
102	GO:0008536: Ran GTPase binding	2.12E-02
103	GO:0046873: metal ion transmembrane transporter activity	2.12E-02
104	GO:0009055: electron carrier activity	2.14E-02
105	GO:0050662: coenzyme binding	2.23E-02
106	GO:0016853: isomerase activity	2.23E-02
107	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.53E-02
108	GO:0004518: nuclease activity	2.58E-02
109	GO:0015297: antiporter activity	2.59E-02
110	GO:0051015: actin filament binding	2.70E-02
111	GO:0005509: calcium ion binding	2.83E-02
112	GO:0043565: sequence-specific DNA binding	2.87E-02
113	GO:0008375: acetylglucosaminyltransferase activity	3.46E-02
114	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.46E-02
115	GO:0102483: scopolin beta-glucosidase activity	3.59E-02
116	GO:0030247: polysaccharide binding	3.59E-02
117	GO:0004683: calmodulin-dependent protein kinase activity	3.59E-02
118	GO:0003824: catalytic activity	3.65E-02
119	GO:0005215: transporter activity	3.69E-02
120	GO:0015238: drug transmembrane transporter activity	4.00E-02
121	GO:0008422: beta-glucosidase activity	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	7.67E-08
2	GO:0090406: pollen tube	1.41E-04
3	GO:0005911: cell-cell junction	2.48E-04
4	GO:0016442: RISC complex	2.48E-04
5	GO:0010494: cytoplasmic stress granule	3.41E-04
6	GO:0016021: integral component of membrane	7.96E-04
7	GO:0005829: cytosol	8.05E-04
8	GO:0000178: exosome (RNase complex)	2.17E-03
9	GO:0005768: endosome	2.43E-03
10	GO:0032580: Golgi cisterna membrane	3.20E-03
11	GO:0016363: nuclear matrix	3.21E-03
12	GO:0030173: integral component of Golgi membrane	3.21E-03
13	GO:0000932: P-body	3.81E-03
14	GO:0016020: membrane	3.92E-03
15	GO:0005794: Golgi apparatus	5.49E-03
16	GO:0005802: trans-Golgi network	6.67E-03
17	GO:0071013: catalytic step 2 spliceosome	7.88E-03
18	GO:0048471: perinuclear region of cytoplasm	7.88E-03
19	GO:0009506: plasmodesma	1.05E-02
20	GO:0005635: nuclear envelope	1.18E-02
21	GO:0010008: endosome membrane	1.34E-02
22	GO:0009536: plastid	1.43E-02
23	GO:0030136: clathrin-coated vesicle	1.90E-02
24	GO:0005770: late endosome	2.12E-02
25	GO:0005778: peroxisomal membrane	2.94E-02
26	GO:0005774: vacuolar membrane	3.28E-02
27	GO:0005643: nuclear pore	3.86E-02
28	GO:0005618: cell wall	4.19E-02