Gene: AT3G52450
     

Gene description


TAIR ID: AT3G52450

Short description: plant U-box 22

Pathogen responsiveness: 2.24

General responsiveness: 1.26

Orthologous


Rice:

OS02G0539200  

Maize:

GRMZM2G071484  

Wheat: No orthologous gene

GO biological process


protein autoubiquitination, defense response, respiratory burst involved in defense response, response to chitin, protein ubiquitination, response to water deprivation


GO cellular component


cytoplasm, cytosol


GO molecular function


ubiquitin-protein transferase activity, protein binding


Protein domain


PfamPF04564, U-box domain
SMARTSM00504, Ubox

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G66600, AT5G13790, AT1G24260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 12 (Top20%)

click to view PPI network

Differentially expressed condition


74 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE11807Col, WT, water 4 hCol, WT, Flg22 4 h4.484.97E-03
GSE11807Col, mpk6 ko, water 4 hCol, mpk6 ko, Flg22 4 h3.723.43E-02
GSE16472Col, WT, Flg22 0 minCol, WT, Flg22 30 min6.084.32E-02
GSE16472Col, WT, Flg22 0 minCol, WT, Flg22 60min5.644.82E-02
GSE17382Col, WT, Flg22 0 minCol, WT, Flg22 60min3.404.51E-02
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d-4.731.22E-15
GSE17464Laer, controlLaer, PstDC3000 12 h-2.711.98E-07
GSE17464Laer, controlLaer, Flg22 1 h1.832.42E-04
GSE17464Laer, controlLaer, Flg22 2 h1.621.02E-03
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d-5.521.19E-18
GSE17464Penta, controlPenta, PstDC3000 12 h-3.422.29E-10
GSE18329Col, WT, controlCol, WT, Hpa noco2 96 h1.603.77E-09
GSE2169Col, WT, waterCol, WT, chitin 30 min1.747.27E-09
GSE2169Col, rre1, waterCol, rre1, chitin 30 min2.402.04E-11
GSE2169Col, rre2, waterCol, rre2, chitin 30 min2.471.48E-11
GSE21920Col, ulp1, mockCol, ulp1, Pto 6 h1.827.63E-03
GSE2538Col, WT, controlCol, WT, crab shell chitin 30 min3.319.01E-08
GSE2538Col, WT, controlCol, WT, purified chitin octamer 30 min2.992.20E-07
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.823.68E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.691.83E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.471.78E-11
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.171.44E-10
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h1.987.88E-10
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min2.566.83E-05
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h2.277.41E-05
GSE52979Col, WT, acetoneCol, WT, acetone flg22_24 h2.603.47E-08
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h4.485.40E-12
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_24 h2.811.23E-08
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h5.128.71E-13
GSE5520Col, WT, control 10 hCol, WT, Cor- hrpS- 10 h2.201.10E-02
GSE5520Col, WT, control 7 hCol, WT, E.coli_0157_H7 7 h2.001.29E-02
GSE5520Col, WT, control 7 hCol, WT, E.coli_TUV86 flic- 7 h2.252.86E-03
GSE5520Col, WT, control 7 hCol, WT, hrpA- 10 h2.282.51E-03
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h1.604.14E-03
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h3.181.31E-07
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h2.574.86E-06
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h3.681.56E-09
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h1.945.43E-04
GSE56094Col, WT, control 12 hCol, WT, hrpA- 12 h2.213.24E-04
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h1.821.05E-03
GSE56094Col, WT, control 13 hCol, WT, hrpA- 13 h1.852.69E-03
GSE56094Col, WT, control 2 hCol, WT, hrpA- 2 h3.071.60E-06
GSE56094Col, WT, control 3 hCol, WT, PstDC3000 3 h2.675.98E-05
GSE56094Col, WT, control 3 hCol, WT, hrpA- 3 h3.144.30E-07
GSE56094Col, WT, control 4 hCol, WT, PstDC3000 4 h3.281.36E-07
GSE56094Col, WT, control 4 hCol, WT, hrpA- 4 h3.036.87E-06
GSE56094Col, WT, control 5 hCol, WT, PstDC3000 5 h3.127.09E-07
GSE56094Col, WT, control 5 hCol, WT, hrpA- 5 h3.851.28E-09
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h3.392.54E-08
GSE56094Col, WT, control 6 hCol, WT, hrpA- 6 h4.541.17E-12
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h2.202.23E-04
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h3.871.10E-09
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h1.801.61E-03
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h3.441.68E-08
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h2.072.82E-04
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h2.697.27E-06
GSE5615Col, WT, GST 4 hCol, WT, GST+NPP1 4 h2.091.98E-07
GSE5615Col, WT, water 1 hCol, WT, Flg22 1 h1.882.82E-06
GSE5615Col, WT, water 1 hCol, WT, HrpZ 1 h1.681.40E-05
GSE5615Col, WT, water 4 hCol, WT, Flg22 4 h5.399.71E-17
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h5.001.35E-15
GSE5615Col, WT, water 4 hCol, WT, LPS 4 h2.134.59E-06
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h1.971.21E-02
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 HrpA- 12 h3.343.80E-07
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h2.257.02E-06
GSE6176Col, WT, control 4 hCol, WT, PstDC3000 AvrRpm1 4 h1.843.84E-04
GSE6176Col, WT, control 4 hCol, WT, PstDC3000 HrpA- 4 h2.078.32E-04
GSE6176Col, WT, control 4 hCol, WT, PstDC3000 4 h1.882.34E-03
GSE8319Col, WT, controlCol, WT, chitooctaose 30 min2.501.63E-13
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h4.551.09E-05
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min5.127.30E-06
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 2-4 h3.894.47E-05
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h2.016.61E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min4.456.21E-06






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