co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G52450

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032499: detection of peptidoglycan	0.00E+00
2	GO:2001143: N-methylnicotinate transport	0.00E+00
3	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
4	GO:0071289: cellular response to nickel ion	0.00E+00
5	GO:1900067: regulation of cellular response to alkaline pH	0.00E+00
6	GO:1903086: negative regulation of sinapate ester biosynthetic process	0.00E+00
7	GO:0006862: nucleotide transport	0.00E+00
8	GO:2001142: nicotinate transport	0.00E+00
9	GO:0032497: detection of lipopolysaccharide	0.00E+00
10	GO:0071629: ubiquitin-dependent catabolism of misfolded proteins by cytoplasm-associated proteasome	0.00E+00
11	GO:0009268: response to pH	0.00E+00
12	GO:0010200: response to chitin	2.32E-13
13	GO:0006468: protein phosphorylation	7.15E-09
14	GO:0009611: response to wounding	1.97E-06
15	GO:0007166: cell surface receptor signaling pathway	6.20E-06
16	GO:1902347: response to strigolactone	6.44E-05
17	GO:0045087: innate immune response	1.67E-04
18	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.00E-04
19	GO:0046777: protein autophosphorylation	2.43E-04
20	GO:0006955: immune response	2.60E-04
21	GO:0080157: regulation of plant-type cell wall organization or biogenesis	3.17E-04
22	GO:0050691: regulation of defense response to virus by host	3.17E-04
23	GO:0032491: detection of molecule of fungal origin	3.17E-04
24	GO:1900384: regulation of flavonol biosynthetic process	3.17E-04
25	GO:0045010: actin nucleation	3.28E-04
26	GO:0048544: recognition of pollen	3.60E-04
27	GO:0009699: phenylpropanoid biosynthetic process	4.03E-04
28	GO:0002229: defense response to oomycetes	4.31E-04
29	GO:0042742: defense response to bacterium	5.84E-04
30	GO:0019538: protein metabolic process	6.67E-04
31	GO:0046939: nucleotide phosphorylation	6.92E-04
32	GO:0042754: negative regulation of circadian rhythm	6.92E-04
33	GO:0010372: positive regulation of gibberellin biosynthetic process	6.92E-04
34	GO:0008219: cell death	9.64E-04
35	GO:0055046: microgametogenesis	9.95E-04
36	GO:0006952: defense response	1.00E-03
37	GO:0010366: negative regulation of ethylene biosynthetic process	1.12E-03
38	GO:0010447: response to acidic pH	1.12E-03
39	GO:0016233: telomere capping	1.12E-03
40	GO:0080168: abscisic acid transport	1.12E-03
41	GO:0048513: animal organ development	1.12E-03
42	GO:0043207: response to external biotic stimulus	1.61E-03
43	GO:0080170: hydrogen peroxide transmembrane transport	1.61E-03
44	GO:0030100: regulation of endocytosis	1.61E-03
45	GO:0009399: nitrogen fixation	1.61E-03
46	GO:0033014: tetrapyrrole biosynthetic process	1.61E-03
47	GO:0015700: arsenite transport	1.61E-03
48	GO:0002679: respiratory burst involved in defense response	1.61E-03
49	GO:0071323: cellular response to chitin	1.61E-03
50	GO:0009695: jasmonic acid biosynthetic process	1.70E-03
51	GO:0016998: cell wall macromolecule catabolic process	1.86E-03
52	GO:0006979: response to oxidative stress	1.94E-03
53	GO:0009617: response to bacterium	2.15E-03
54	GO:0045227: capsule polysaccharide biosynthetic process	2.16E-03
55	GO:0033358: UDP-L-arabinose biosynthetic process	2.16E-03
56	GO:0010107: potassium ion import	2.16E-03
57	GO:0071219: cellular response to molecule of bacterial origin	2.16E-03
58	GO:0034440: lipid oxidation	2.16E-03
59	GO:0009686: gibberellin biosynthetic process	2.22E-03
60	GO:0009753: response to jasmonic acid	2.26E-03
61	GO:0009809: lignin biosynthetic process	2.61E-03
62	GO:0009164: nucleoside catabolic process	2.76E-03
63	GO:0045487: gibberellin catabolic process	2.76E-03
64	GO:2000762: regulation of phenylpropanoid metabolic process	2.76E-03
65	GO:0030041: actin filament polymerization	2.76E-03
66	GO:0015691: cadmium ion transport	3.40E-03
67	GO:0006751: glutathione catabolic process	3.40E-03
68	GO:0048317: seed morphogenesis	3.40E-03
69	GO:0006828: manganese ion transport	3.40E-03
70	GO:1900425: negative regulation of defense response to bacterium	3.40E-03
71	GO:0010337: regulation of salicylic acid metabolic process	3.40E-03
72	GO:0009737: response to abscisic acid	3.56E-03
73	GO:0009620: response to fungus	3.64E-03
74	GO:0080086: stamen filament development	4.10E-03
75	GO:0010044: response to aluminum ion	4.84E-03
76	GO:0010161: red light signaling pathway	4.84E-03
77	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	4.84E-03
78	GO:0016310: phosphorylation	4.97E-03
79	GO:0006402: mRNA catabolic process	5.62E-03
80	GO:1900150: regulation of defense response to fungus	5.62E-03
81	GO:0006605: protein targeting	5.62E-03
82	GO:2000070: regulation of response to water deprivation	5.62E-03
83	GO:0048658: anther wall tapetum development	5.62E-03
84	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	5.75E-03
85	GO:0009845: seed germination	6.02E-03
86	GO:0035556: intracellular signal transduction	6.03E-03
87	GO:0009932: cell tip growth	6.44E-03
88	GO:0010262: somatic embryogenesis	6.44E-03
89	GO:0009817: defense response to fungus, incompatible interaction	7.10E-03
90	GO:0098656: anion transmembrane transport	7.30E-03
91	GO:0046685: response to arsenic-containing substance	7.30E-03
92	GO:0051865: protein autoubiquitination	7.30E-03
93	GO:0090305: nucleic acid phosphodiester bond hydrolysis	7.30E-03
94	GO:0090333: regulation of stomatal closure	7.30E-03
95	GO:0006783: heme biosynthetic process	7.30E-03
96	GO:0010311: lateral root formation	7.46E-03
97	GO:0006779: porphyrin-containing compound biosynthetic process	8.21E-03
98	GO:0009086: methionine biosynthetic process	8.21E-03
99	GO:2000280: regulation of root development	8.21E-03
100	GO:0008202: steroid metabolic process	8.21E-03
101	GO:0016567: protein ubiquitination	8.22E-03
102	GO:0006782: protoporphyrinogen IX biosynthetic process	9.15E-03
103	GO:0006032: chitin catabolic process	9.15E-03
104	GO:0048829: root cap development	9.15E-03
105	GO:0010015: root morphogenesis	1.01E-02
106	GO:0006816: calcium ion transport	1.01E-02
107	GO:0015770: sucrose transport	1.01E-02
108	GO:1903507: negative regulation of nucleic acid-templated transcription	1.01E-02
109	GO:0000272: polysaccharide catabolic process	1.01E-02
110	GO:0006839: mitochondrial transport	1.03E-02
111	GO:0018107: peptidyl-threonine phosphorylation	1.22E-02
112	GO:0006357: regulation of transcription from RNA polymerase II promoter	1.23E-02
113	GO:0034605: cellular response to heat	1.33E-02
114	GO:0002237: response to molecule of bacterial origin	1.33E-02
115	GO:0031347: regulation of defense response	1.41E-02
116	GO:0009225: nucleotide-sugar metabolic process	1.44E-02
117	GO:0009901: anther dehiscence	1.44E-02
118	GO:0005985: sucrose metabolic process	1.44E-02
119	GO:0071732: cellular response to nitric oxide	1.44E-02
120	GO:0090351: seedling development	1.44E-02
121	GO:0006970: response to osmotic stress	1.57E-02
122	GO:0010224: response to UV-B	1.63E-02
123	GO:0009863: salicylic acid mediated signaling pathway	1.67E-02
124	GO:0043622: cortical microtubule organization	1.80E-02
125	GO:0009555: pollen development	1.91E-02
126	GO:0098542: defense response to other organism	1.92E-02
127	GO:0031408: oxylipin biosynthetic process	1.92E-02
128	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.96E-02
129	GO:0009626: plant-type hypersensitive response	1.99E-02
130	GO:0071456: cellular response to hypoxia	2.05E-02
131	GO:0030245: cellulose catabolic process	2.05E-02
132	GO:0035428: hexose transmembrane transport	2.05E-02
133	GO:0016226: iron-sulfur cluster assembly	2.05E-02
134	GO:2000022: regulation of jasmonic acid mediated signaling pathway	2.05E-02
135	GO:0030433: ubiquitin-dependent ERAD pathway	2.05E-02
136	GO:0006012: galactose metabolic process	2.18E-02
137	GO:0071215: cellular response to abscisic acid stimulus	2.18E-02
138	GO:0071369: cellular response to ethylene stimulus	2.18E-02
139	GO:0040007: growth	2.18E-02
140	GO:0010089: xylem development	2.31E-02
141	GO:0006817: phosphate ion transport	2.31E-02
142	GO:0019722: calcium-mediated signaling	2.31E-02
143	GO:0010091: trichome branching	2.31E-02
144	GO:0009306: protein secretion	2.31E-02
145	GO:0009742: brassinosteroid mediated signaling pathway	2.38E-02
146	GO:0010118: stomatal movement	2.59E-02
147	GO:0048653: anther development	2.59E-02
148	GO:0042631: cellular response to water deprivation	2.59E-02
149	GO:0055085: transmembrane transport	2.72E-02
150	GO:0046323: glucose import	2.73E-02
151	GO:0009960: endosperm development	2.73E-02
152	GO:0009751: response to salicylic acid	3.01E-02
153	GO:0009749: response to glucose	3.02E-02
154	GO:0010193: response to ozone	3.17E-02
155	GO:0031047: gene silencing by RNA	3.32E-02
156	GO:1901657: glycosyl compound metabolic process	3.48E-02
157	GO:0071281: cellular response to iron ion	3.48E-02
158	GO:0010090: trichome morphogenesis	3.48E-02
159	GO:0019760: glucosinolate metabolic process	3.64E-02
160	GO:0009639: response to red or far red light	3.64E-02
161	GO:0006904: vesicle docking involved in exocytosis	3.80E-02
162	GO:0007623: circadian rhythm	3.87E-02
163	GO:0010150: leaf senescence	3.87E-02
164	GO:0046686: response to cadmium ion	3.90E-02
165	GO:0001666: response to hypoxia	4.12E-02
166	GO:0015995: chlorophyll biosynthetic process	4.63E-02
167	GO:0048573: photoperiodism, flowering	4.63E-02
168	GO:0016049: cell growth	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
2	GO:0090416: nicotinate transporter activity	0.00E+00
3	GO:0015215: nucleotide transmembrane transporter activity	0.00E+00
4	GO:0005522: profilin binding	0.00E+00
5	GO:0047734: CDP-glycerol diphosphatase activity	0.00E+00
6	GO:2001080: chitosan binding	0.00E+00
7	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
8	GO:0016301: kinase activity	5.62E-10
9	GO:0004674: protein serine/threonine kinase activity	3.42E-08
10	GO:0005524: ATP binding	1.29E-05
11	GO:0004672: protein kinase activity	3.01E-05
12	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.59E-05
13	GO:0047631: ADP-ribose diphosphatase activity	1.01E-04
14	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.42E-04
15	GO:0030246: carbohydrate binding	2.04E-04
16	GO:0016621: cinnamoyl-CoA reductase activity	2.60E-04
17	GO:0043565: sequence-specific DNA binding	2.92E-04
18	GO:0090440: abscisic acid transporter activity	3.17E-04
19	GO:0047150: betaine-homocysteine S-methyltransferase activity	3.17E-04
20	GO:0015105: arsenite transmembrane transporter activity	6.92E-04
21	GO:0008898: S-adenosylmethionine-homocysteine S-methyltransferase activity	6.92E-04
22	GO:0004103: choline kinase activity	6.92E-04
23	GO:0008883: glutamyl-tRNA reductase activity	6.92E-04
24	GO:0003840: gamma-glutamyltransferase activity	1.12E-03
25	GO:0036374: glutathione hydrolase activity	1.12E-03
26	GO:0046423: allene-oxide cyclase activity	1.12E-03
27	GO:0004383: guanylate cyclase activity	1.12E-03
28	GO:0016165: linoleate 13S-lipoxygenase activity	1.12E-03
29	GO:0008061: chitin binding	1.25E-03
30	GO:0015144: carbohydrate transmembrane transporter activity	1.32E-03
31	GO:0005351: sugar:proton symporter activity	1.59E-03
32	GO:0019201: nucleotide kinase activity	1.61E-03
33	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	1.61E-03
34	GO:0001653: peptide receptor activity	1.61E-03
35	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	1.61E-03
36	GO:0033612: receptor serine/threonine kinase binding	1.86E-03
37	GO:0015368: calcium:cation antiporter activity	2.16E-03
38	GO:0050373: UDP-arabinose 4-epimerase activity	2.16E-03
39	GO:0015369: calcium:proton antiporter activity	2.16E-03
40	GO:0043015: gamma-tubulin binding	2.16E-03
41	GO:0019199: transmembrane receptor protein kinase activity	2.16E-03
42	GO:0004356: glutamate-ammonia ligase activity	2.76E-03
43	GO:0018685: alkane 1-monooxygenase activity	2.76E-03
44	GO:0050662: coenzyme binding	3.28E-03
45	GO:0035673: oligopeptide transmembrane transporter activity	3.40E-03
46	GO:0000210: NAD+ diphosphatase activity	3.40E-03
47	GO:0004842: ubiquitin-protein transferase activity	3.87E-03
48	GO:0050660: flavin adenine dinucleotide binding	4.00E-03
49	GO:0019900: kinase binding	4.10E-03
50	GO:0051020: GTPase binding	4.10E-03
51	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	4.10E-03
52	GO:0004017: adenylate kinase activity	4.10E-03
53	GO:0003978: UDP-glucose 4-epimerase activity	4.10E-03
54	GO:0004143: diacylglycerol kinase activity	4.84E-03
55	GO:0008506: sucrose:proton symporter activity	4.84E-03
56	GO:0008143: poly(A) binding	4.84E-03
57	GO:0043295: glutathione binding	4.84E-03
58	GO:0004714: transmembrane receptor protein tyrosine kinase activity	5.62E-03
59	GO:0052747: sinapyl alcohol dehydrogenase activity	5.62E-03
60	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	5.85E-03
61	GO:0044212: transcription regulatory region DNA binding	6.08E-03
62	GO:0008142: oxysterol binding	6.44E-03
63	GO:0003951: NAD+ kinase activity	6.44E-03
64	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	6.88E-03
65	GO:0016207: 4-coumarate-CoA ligase activity	7.30E-03
66	GO:0047617: acyl-CoA hydrolase activity	8.21E-03
67	GO:0009055: electron carrier activity	8.94E-03
68	GO:0004568: chitinase activity	9.15E-03
69	GO:0004713: protein tyrosine kinase activity	9.15E-03
70	GO:0008515: sucrose transmembrane transporter activity	1.01E-02
71	GO:0015198: oligopeptide transporter activity	1.11E-02
72	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.11E-02
73	GO:0005516: calmodulin binding	1.12E-02
74	GO:0005315: inorganic phosphate transmembrane transporter activity	1.22E-02
75	GO:0003714: transcription corepressor activity	1.67E-02
76	GO:0031625: ubiquitin protein ligase binding	1.74E-02
77	GO:0051087: chaperone binding	1.80E-02
78	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.92E-02
79	GO:0008408: 3'-5' exonuclease activity	1.92E-02
80	GO:0004707: MAP kinase activity	1.92E-02
81	GO:0022891: substrate-specific transmembrane transporter activity	2.18E-02
82	GO:0003779: actin binding	2.18E-02
83	GO:0008514: organic anion transmembrane transporter activity	2.31E-02
84	GO:0005102: receptor binding	2.45E-02
85	GO:0016853: isomerase activity	2.88E-02
86	GO:0005355: glucose transmembrane transporter activity	2.88E-02
87	GO:0004518: nuclease activity	3.32E-02
88	GO:0051015: actin filament binding	3.48E-02
89	GO:0015297: antiporter activity	3.70E-02
90	GO:0015250: water channel activity	4.12E-02
91	GO:0102483: scopolin beta-glucosidase activity	4.63E-02
92	GO:0030247: polysaccharide binding	4.63E-02
93	GO:0004721: phosphoprotein phosphatase activity	4.63E-02
94	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	5.66E-12
2	GO:0016021: integral component of membrane	9.17E-05
3	GO:0005911: cell-cell junction	3.17E-04
4	GO:0016442: RISC complex	3.17E-04
5	GO:0010494: cytoplasmic stress granule	4.84E-04
6	GO:0090404: pollen tube tip	7.70E-04
7	GO:0090406: pollen tube	1.78E-03
8	GO:0000784: nuclear chromosome, telomeric region	6.44E-03
9	GO:0009505: plant-type cell wall	9.44E-03
10	GO:0048471: perinuclear region of cytoplasm	1.01E-02
11	GO:0031902: late endosome membrane	1.07E-02
12	GO:0043234: protein complex	1.56E-02
13	GO:0005758: mitochondrial intermembrane space	1.67E-02
14	GO:0010008: endosome membrane	1.92E-02
15	GO:0012505: endomembrane system	2.18E-02
16	GO:0030136: clathrin-coated vesicle	2.45E-02
17	GO:0005770: late endosome	2.73E-02
18	GO:0009506: plasmodesma	2.84E-02
19	GO:0000145: exocyst	3.32E-02
20	GO:0005618: cell wall	3.56E-02
21	GO:0032580: Golgi cisterna membrane	3.64E-02
22	GO:0000932: P-body	4.12E-02