gene detail

Gene description

TAIR ID: AT3G50060

Short description: myb domain protein 77

Pathogen responsiveness: -0.69

General responsiveness: 0.43

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

lateral root development, regulation of transcription, DNA-templated, response to salicylic acid, regulation of transcription from RNA polymerase II promoter, response to ethylene, response to chitin, cell differentiation

GO cellular component

nucleus

GO molecular function

protein binding, transcription factor activity, RNA polymerase II transcription factor recruiting, RNA polymerase II transcription factor activity, sequence-specific DNA binding, transcription regulatory region DNA binding

Protein domain

Pfam	PF00249, Myb-like DNA-binding domain
SMART	SM00717, SANT

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 12 (Top20%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view

Differentially expressed condition

13 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE13739	Col, WT, control 0 h	Col, WT, G.orontii 6 h	2.44	2.18E-04
GSE13739	Col, eds, control 0 h	Col, eds, G.orontii 6 h	2.28	5.56E-04
GSE2169	Col, WT, water	Col, WT, chitin 30 min	1.79	6.39E-07
GSE2169	Col, rre1, water	Col, rre1, chitin 30 min	2.38	4.57E-09
GSE2169	Col, rre2, water	Col, rre2, chitin 30 min	1.87	2.39E-07
GSE2538	Col, WT, control	Col, WT, crab shell chitin 30 min	1.66	3.24E-06
GSE2538	Col, WT, control	Col, WT, purified chitin octamer 30 min	1.54	6.38E-06
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	-1.76	1.56E-05
GSE26679	Col, WT, GC 0 h	Col, WT, GC 96 h	-1.94	1.83E-05
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	-1.83	5.78E-06
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 96 h	-1.82	3.49E-05
GSE4746	Col, WT, water 30 min	Col, WT, chitooctaose 30 min	2.76	4.90E-05
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min	1.51	2.94E-02