Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G50060

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)0.00E+00
2GO:0080127: fruit septum development0.00E+00
3GO:0006792: regulation of sulfur utilization0.00E+00
4GO:0010200: response to chitin2.04E-08
5GO:0010438: cellular response to sulfur starvation2.12E-05
6GO:0009741: response to brassinosteroid4.82E-05
7GO:0010439: regulation of glucosinolate biosynthetic process7.88E-05
8GO:0050691: regulation of defense response to virus by host1.23E-04
9GO:0033481: galacturonate biosynthetic process1.23E-04
10GO:0080164: regulation of nitric oxide metabolic process1.23E-04
11GO:0010411: xyloglucan metabolic process1.47E-04
12GO:0009751: response to salicylic acid1.70E-04
13GO:0071497: cellular response to freezing2.86E-04
14GO:0051592: response to calcium ion2.86E-04
15GO:0080168: abscisic acid transport4.72E-04
16GO:0019419: sulfate reduction4.72E-04
17GO:0010581: regulation of starch biosynthetic process4.72E-04
18GO:2000022: regulation of jasmonic acid mediated signaling pathway5.65E-04
19GO:0019722: calcium-mediated signaling6.66E-04
20GO:1902358: sulfate transmembrane transport6.76E-04
21GO:0000271: polysaccharide biosynthetic process7.76E-04
22GO:0046345: abscisic acid catabolic process8.97E-04
23GO:2000762: regulation of phenylpropanoid metabolic process1.13E-03
24GO:0009753: response to jasmonic acid1.16E-03
25GO:0009828: plant-type cell wall loosening1.22E-03
26GO:0007267: cell-cell signaling1.30E-03
27GO:0003006: developmental process involved in reproduction1.39E-03
28GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.53E-03
29GO:0006357: regulation of transcription from RNA polymerase II promoter1.59E-03
30GO:0006355: regulation of transcription, DNA-templated1.60E-03
31GO:0009612: response to mechanical stimulus1.66E-03
32GO:0048573: photoperiodism, flowering1.70E-03
33GO:0009737: response to abscisic acid1.87E-03
34GO:0050829: defense response to Gram-negative bacterium1.95E-03
35GO:0051510: regulation of unidimensional cell growth1.95E-03
36GO:0010038: response to metal ion1.95E-03
37GO:0030154: cell differentiation2.06E-03
38GO:0030162: regulation of proteolysis2.26E-03
39GO:2000070: regulation of response to water deprivation2.26E-03
40GO:0035265: organ growth2.26E-03
41GO:0009826: unidimensional cell growth2.48E-03
42GO:0048574: long-day photoperiodism, flowering2.58E-03
43GO:2000031: regulation of salicylic acid mediated signaling pathway2.58E-03
44GO:0010099: regulation of photomorphogenesis2.58E-03
45GO:0048507: meristem development2.91E-03
46GO:0051865: protein autoubiquitination2.91E-03
47GO:0042542: response to hydrogen peroxide2.94E-03
48GO:0042546: cell wall biogenesis3.18E-03
49GO:0009638: phototropism3.26E-03
50GO:0000103: sulfate assimilation3.62E-03
51GO:0043069: negative regulation of programmed cell death3.62E-03
52GO:0051555: flavonol biosynthetic process3.62E-03
53GO:0031347: regulation of defense response3.69E-03
54GO:1903507: negative regulation of nucleic acid-templated transcription4.00E-03
55GO:0000272: polysaccharide catabolic process4.00E-03
56GO:0010015: root morphogenesis4.00E-03
57GO:0000038: very long-chain fatty acid metabolic process4.00E-03
58GO:2000652: regulation of secondary cell wall biogenesis4.00E-03
59GO:0009585: red, far-red light phototransduction4.11E-03
60GO:0045454: cell redox homeostasis4.29E-03
61GO:0010582: floral meristem determinacy4.39E-03
62GO:0016925: protein sumoylation4.39E-03
63GO:0016024: CDP-diacylglycerol biosynthetic process4.39E-03
64GO:0018107: peptidyl-threonine phosphorylation4.79E-03
65GO:0009718: anthocyanin-containing compound biosynthetic process4.79E-03
66GO:0048467: gynoecium development5.20E-03
67GO:0034605: cellular response to heat5.20E-03
68GO:0010143: cutin biosynthetic process5.20E-03
69GO:0002237: response to molecule of bacterial origin5.20E-03
70GO:0009969: xyloglucan biosynthetic process5.63E-03
71GO:0009225: nucleotide-sugar metabolic process5.63E-03
72GO:0009742: brassinosteroid mediated signaling pathway6.18E-03
73GO:0006487: protein N-linked glycosylation6.51E-03
74GO:0019344: cysteine biosynthetic process6.51E-03
75GO:0019953: sexual reproduction6.98E-03
76GO:0009414: response to water deprivation6.99E-03
77GO:0016998: cell wall macromolecule catabolic process7.45E-03
78GO:0009873: ethylene-activated signaling pathway7.74E-03
79GO:0006351: transcription, DNA-templated7.93E-03
80GO:0010017: red or far-red light signaling pathway7.93E-03
81GO:0040007: growth8.43E-03
82GO:0009733: response to auxin8.64E-03
83GO:0048653: anther development9.99E-03
84GO:0009958: positive gravitropism1.05E-02
85GO:0010268: brassinosteroid homeostasis1.05E-02
86GO:0045489: pectin biosynthetic process1.05E-02
87GO:0009738: abscisic acid-activated signaling pathway1.11E-02
88GO:0009646: response to absence of light1.11E-02
89GO:0009739: response to gibberellin1.13E-02
90GO:0009791: post-embryonic development1.16E-02
91GO:0009611: response to wounding1.19E-02
92GO:0002229: defense response to oomycetes1.22E-02
93GO:0016132: brassinosteroid biosynthetic process1.22E-02
94GO:0048510: regulation of timing of transition from vegetative to reproductive phase1.22E-02
95GO:0016567: protein ubiquitination1.23E-02
96GO:0010583: response to cyclopentenone1.28E-02
97GO:0045893: positive regulation of transcription, DNA-templated1.38E-02
98GO:0009639: response to red or far red light1.40E-02
99GO:0016125: sterol metabolic process1.40E-02
100GO:0019760: glucosinolate metabolic process1.40E-02
101GO:0009658: chloroplast organization1.56E-02
102GO:0001666: response to hypoxia1.58E-02
103GO:0009723: response to ethylene1.81E-02
104GO:0016049: cell growth1.85E-02
105GO:0016311: dephosphorylation1.85E-02
106GO:0048767: root hair elongation1.98E-02
107GO:0010218: response to far red light2.05E-02
108GO:0046777: protein autophosphorylation2.08E-02
109GO:0045087: innate immune response2.26E-02
110GO:0016051: carbohydrate biosynthetic process2.26E-02
111GO:0010114: response to red light2.71E-02
112GO:0071555: cell wall organization2.82E-02
113GO:0006855: drug transmembrane transport3.03E-02
114GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process3.11E-02
115GO:0009664: plant-type cell wall organization3.19E-02
116GO:0006486: protein glycosylation3.35E-02
117GO:0009909: regulation of flower development3.60E-02
118GO:0009409: response to cold4.10E-02
119GO:0018105: peptidyl-serine phosphorylation4.40E-02
RankGO TermAdjusted P value
1GO:0045552: dihydrokaempferol 4-reductase activity0.00E+00
2GO:0047890: flavanone 4-reductase activity0.00E+00
3GO:0043565: sequence-specific DNA binding2.90E-06
4GO:0090440: abscisic acid transporter activity1.23E-04
5GO:0080132: fatty acid alpha-hydroxylase activity1.23E-04
6GO:0009973: adenylyl-sulfate reductase activity2.86E-04
7GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity2.86E-04
8GO:0033741: adenylyl-sulfate reductase (glutathione) activity2.86E-04
9GO:0044212: transcription regulatory region DNA binding4.16E-04
10GO:0010295: (+)-abscisic acid 8'-hydroxylase activity4.72E-04
11GO:0003700: transcription factor activity, sequence-specific DNA binding6.67E-04
12GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity6.76E-04
13GO:0033843: xyloglucan 6-xylosyltransferase activity6.76E-04
14GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting7.65E-04
15GO:0050378: UDP-glucuronate 4-epimerase activity8.97E-04
16GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding8.98E-04
17GO:0016762: xyloglucan:xyloglucosyl transferase activity1.02E-03
18GO:0018685: alkane 1-monooxygenase activity1.13E-03
19GO:0031386: protein tag1.13E-03
20GO:0004366: glycerol-3-phosphate O-acyltransferase activity1.39E-03
21GO:0035252: UDP-xylosyltransferase activity1.39E-03
22GO:0010427: abscisic acid binding1.39E-03
23GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity1.39E-03
24GO:0080046: quercetin 4'-O-glucosyltransferase activity1.39E-03
25GO:0016161: beta-amylase activity1.66E-03
26GO:0016798: hydrolase activity, acting on glycosyl bonds1.70E-03
27GO:0008271: secondary active sulfate transmembrane transporter activity2.58E-03
28GO:0004864: protein phosphatase inhibitor activity3.62E-03
29GO:0015116: sulfate transmembrane transporter activity4.39E-03
30GO:0016757: transferase activity, transferring glycosyl groups4.70E-03
31GO:0003712: transcription cofactor activity5.63E-03
32GO:0003714: transcription corepressor activity6.51E-03
33GO:0016758: transferase activity, transferring hexosyl groups7.11E-03
34GO:0035251: UDP-glucosyltransferase activity7.45E-03
35GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity7.93E-03
36GO:0004402: histone acetyltransferase activity9.99E-03
37GO:0001085: RNA polymerase II transcription factor binding1.05E-02
38GO:0050662: coenzyme binding1.11E-02
39GO:0004872: receptor activity1.16E-02
40GO:0004842: ubiquitin-protein transferase activity1.18E-02
41GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor1.34E-02
42GO:0016791: phosphatase activity1.40E-02
43GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity1.46E-02
44GO:0008375: acetylglucosaminyltransferase activity1.71E-02
45GO:0015238: drug transmembrane transporter activity1.98E-02
46GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding2.12E-02
47GO:0003677: DNA binding2.41E-02
48GO:0004871: signal transducer activity2.44E-02
49GO:0005506: iron ion binding2.77E-02
50GO:0043621: protein self-association2.87E-02
51GO:0015293: symporter activity2.95E-02
52GO:0009055: electron carrier activity3.08E-02
53GO:0016298: lipase activity3.44E-02
54GO:0031625: ubiquitin protein ligase binding3.60E-02
55GO:0080043: quercetin 3-O-glucosyltransferase activity4.04E-02
56GO:0080044: quercetin 7-O-glucosyltransferase activity4.04E-02
57GO:0015035: protein disulfide oxidoreductase activity4.40E-02
58GO:0016746: transferase activity, transferring acyl groups4.40E-02
RankGO TermAdjusted P value
1GO:0090568: nuclear transcriptional repressor complex0.00E+00
2GO:0042406: extrinsic component of endoplasmic reticulum membrane4.72E-04
3GO:0048046: apoplast1.64E-03
4GO:0005615: extracellular space1.73E-03
5GO:0005794: Golgi apparatus3.48E-03
6GO:0031225: anchored component of membrane4.88E-03
7GO:0015629: actin cytoskeleton8.43E-03
8GO:0009505: plant-type cell wall1.02E-02
9GO:0005770: late endosome1.05E-02
10GO:0046658: anchored component of plasma membrane1.34E-02
11GO:0032580: Golgi cisterna membrane1.40E-02
12GO:0005667: transcription factor complex1.71E-02
13GO:0019005: SCF ubiquitin ligase complex1.91E-02
14GO:0031902: late endosome membrane2.56E-02
15GO:0043231: intracellular membrane-bounded organelle3.16E-02
Gene type



Gene DE type