Gene: AT3G49530
     

Gene description


TAIR ID: AT3G49530

Short description: NAC domain containing protein 62

Pathogen responsiveness: 0.30

General responsiveness: 0.11

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


defense response, incompatible interaction, transcription, DNA-templated, cellular response to cold, response to chitin, positive regulation of endoplasmic reticulum unfolded protein response, regulation of transcription, multicellular organism development


GO cellular component


plasma membrane, nucleus, integral component of membrane


GO molecular function


DNA binding, transcription factor activity, sequence-specific DNA binding


Protein domain


PfamPF02365, No apical meristem (NAM) protein

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G24260, AT2G43010, AT4G36990

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


24 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE11807Col, WT, water 4 hCol, WT, Flg22 4 h2.102.44E-02
GSE12856Col, ataf1, controlCol, ataf1, Bg h1.761.50E-06
GSE17464Laer, controlLaer, Flg22 1 h2.502.76E-06
GSE17464Penta, controlPenta, Flg22 2 h2.058.46E-05
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h1.832.11E-06
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h1.541.59E-05
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h2.043.13E-09
GSE2169Col, rre1, waterCol, rre1, chitin 30 min1.678.25E-10
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h1.512.23E-07
GSE2538Col, WT, controlCol, WT, crab shell chitin 30 min2.391.44E-06
GSE2538Col, WT, controlCol, WT, purified chitin octamer 30 min2.104.22E-06
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h3.191.45E-13
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.971.89E-10
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h3.107.12E-14
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h2.801.22E-12
GSE4746Col, WT, water 30 minCol, WT, chitooctaose 30 min2.221.41E-04
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h2.431.77E-04
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h1.557.66E-07
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h2.403.03E-03
GSE8319Col, WT, controlCol, WT, chitooctaose 30 min2.141.79E-12
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h2.368.79E-05
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h2.886.84E-05
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 2-4 h1.886.21E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h2.966.24E-05






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