gene detail

Gene description

TAIR ID: AT3G48550

No short description

Pathogen responsiveness: -1.21

General responsiveness: -2.48

Orthologous

Rice:

Maize:

Wheat: No orthologous gene

GO biological process

biological_process

GO cellular component

nucleus

GO molecular function

molecular_function

Protein domain

No domain annotation

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G24260

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 15 (Top20%)

Coexpression network

GSE13739_WT_GO view
GSE26679_EDR1_GC view

Differentially expressed condition

8 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-3.39	4.01E-06
GSE37269	Ler0, WT, control	Ler0, WT, TEV 21 d	-1.62	3.61E-02
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.02	2.46E-03
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.63	9.61E-11
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-2.97	4.14E-12
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-2.22	3.72E-10
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-2.36	5.42E-11
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	-2.09	1.16E-09