gene detail

Gene description

TAIR ID: AT3G48020

No short description

Pathogen responsiveness: 0.52

General responsiveness: 0.18

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

biological_process

GO cellular component

nucleus

GO molecular function

molecular_function

Protein domain

No domain annotation

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G16857, AT4G16110

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

27 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Flg22 2 h	1.73	7.57E-05
GSE17464	Penta, control	Penta, Alternaria brassicicola 3 d	1.77	3.93E-05
GSE17464	Penta, control	Penta, Flg22 2 h	1.66	1.12E-04
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	2.85	9.16E-05
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	3.11	2.45E-05
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	3.27	2.60E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	3.36	3.25E-09
GSE21920	Col, WT, mock	Col, WT, Pto HopZ1a 6 h	2.04	3.23E-07
GSE26679	Col, WT, GC 0 h	Col, WT, GC 96 h	1.75	9.92E-04
GSE37269	Di2, WT, control	Di2, WT, TEV 21 d	-1.97	5.11E-03
GSE37269	Oy0, WT, control	Oy0, WT, TEV 21 d	-2.08	2.47E-02
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.31	9.03E-05
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	2.44	1.74E-04
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	2.57	9.42E-05
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	2.10	7.09E-04
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	3.98	2.90E-16
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	3.23	4.27E-15
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	2.12	7.83E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	2.48	1.16E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	3.06	4.80E-15
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	1.81	2.30E-09
GSE50526	Col, WT, mock 9 h	Col, WT, A. brassicicola 9 h	2.84	2.27E-04
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	2.43	3.45E-05
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	1.53	7.19E-04
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	1.89	3.34E-02
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	2.60	1.49E-05
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	2.03	1.37E-04