Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G48020

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0072722: response to amitrole0.00E+00
2GO:0010055: atrichoblast differentiation0.00E+00
3GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
4GO:0002084: protein depalmitoylation0.00E+00
5GO:2001253: regulation of histone H3-K36 trimethylation0.00E+00
6GO:0097250: mitochondrial respiratory chain supercomplex assembly0.00E+00
7GO:0046865: terpenoid transport0.00E+00
8GO:0010793: regulation of mRNA export from nucleus0.00E+00
9GO:0034756: regulation of iron ion transport0.00E+00
10GO:1900056: negative regulation of leaf senescence7.70E-06
11GO:0006517: protein deglycosylation1.94E-05
12GO:0006623: protein targeting to vacuole3.77E-05
13GO:0010104: regulation of ethylene-activated signaling pathway4.29E-05
14GO:0071369: cellular response to ethylene stimulus2.57E-04
15GO:0031123: RNA 3'-end processing3.50E-04
16GO:0099132: ATP hydrolysis coupled cation transmembrane transport3.50E-04
17GO:0009700: indole phytoalexin biosynthetic process3.50E-04
18GO:0098789: pre-mRNA cleavage required for polyadenylation3.50E-04
19GO:0010230: alternative respiration3.50E-04
20GO:0042868: antisense RNA metabolic process3.50E-04
21GO:0032107: regulation of response to nutrient levels3.50E-04
22GO:0010120: camalexin biosynthetic process4.65E-04
23GO:0046939: nucleotide phosphorylation7.62E-04
24GO:1902066: regulation of cell wall pectin metabolic process7.62E-04
25GO:0048569: post-embryonic animal organ development7.62E-04
26GO:0050684: regulation of mRNA processing7.62E-04
27GO:0042853: L-alanine catabolic process7.62E-04
28GO:0006672: ceramide metabolic process7.62E-04
29GO:0008535: respiratory chain complex IV assembly7.62E-04
30GO:0051252: regulation of RNA metabolic process7.62E-04
31GO:0009156: ribonucleoside monophosphate biosynthetic process7.62E-04
32GO:0080183: response to photooxidative stress7.62E-04
33GO:0015709: thiosulfate transport7.62E-04
34GO:0071422: succinate transmembrane transport7.62E-04
35GO:0042742: defense response to bacterium8.38E-04
36GO:0009627: systemic acquired resistance9.52E-04
37GO:0006790: sulfur compound metabolic process1.01E-03
38GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process1.23E-03
39GO:0010272: response to silver ion1.23E-03
40GO:0015692: lead ion transport1.23E-03
41GO:0060968: regulation of gene silencing1.23E-03
42GO:0080168: abscisic acid transport1.23E-03
43GO:0048586: regulation of long-day photoperiodism, flowering1.23E-03
44GO:0032922: circadian regulation of gene expression1.23E-03
45GO:0071367: cellular response to brassinosteroid stimulus1.23E-03
46GO:0032784: regulation of DNA-templated transcription, elongation1.23E-03
47GO:1901672: positive regulation of systemic acquired resistance1.23E-03
48GO:0061158: 3'-UTR-mediated mRNA destabilization1.23E-03
49GO:0017006: protein-tetrapyrrole linkage1.23E-03
50GO:0055074: calcium ion homeostasis1.23E-03
51GO:0045836: positive regulation of meiotic nuclear division1.23E-03
52GO:0046854: phosphatidylinositol phosphorylation1.44E-03
53GO:0015729: oxaloacetate transport1.78E-03
54GO:0009584: detection of visible light1.78E-03
55GO:0010731: protein glutathionylation1.78E-03
56GO:0006516: glycoprotein catabolic process1.78E-03
57GO:0002679: respiratory burst involved in defense response1.78E-03
58GO:0006515: misfolded or incompletely synthesized protein catabolic process1.78E-03
59GO:0055089: fatty acid homeostasis1.78E-03
60GO:0000187: activation of MAPK activity1.78E-03
61GO:0010150: leaf senescence2.06E-03
62GO:0009814: defense response, incompatible interaction2.36E-03
63GO:0033320: UDP-D-xylose biosynthetic process2.38E-03
64GO:0006536: glutamate metabolic process2.38E-03
65GO:0010363: regulation of plant-type hypersensitive response2.38E-03
66GO:0010188: response to microbial phytotoxin2.38E-03
67GO:0009165: nucleotide biosynthetic process2.38E-03
68GO:0042147: retrograde transport, endosome to Golgi3.03E-03
69GO:0045927: positive regulation of growth3.05E-03
70GO:0071423: malate transmembrane transport3.05E-03
71GO:0042732: D-xylose metabolic process3.76E-03
72GO:0042176: regulation of protein catabolic process3.76E-03
73GO:0060918: auxin transport3.76E-03
74GO:0006139: nucleobase-containing compound metabolic process3.76E-03
75GO:0035435: phosphate ion transmembrane transport3.76E-03
76GO:0006561: proline biosynthetic process3.76E-03
77GO:0048544: recognition of pollen3.79E-03
78GO:0009626: plant-type hypersensitive response4.23E-03
79GO:0010193: response to ozone4.36E-03
80GO:0006891: intra-Golgi vesicle-mediated transport4.36E-03
81GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response4.54E-03
82GO:0048280: vesicle fusion with Golgi apparatus4.54E-03
83GO:0080186: developmental vegetative growth5.36E-03
84GO:2000014: regulation of endosperm development5.36E-03
85GO:0015937: coenzyme A biosynthetic process5.36E-03
86GO:0000122: negative regulation of transcription from RNA polymerase II promoter5.36E-03
87GO:0008272: sulfate transport5.36E-03
88GO:0051607: defense response to virus5.95E-03
89GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline6.22E-03
90GO:0009819: drought recovery6.22E-03
91GO:0006491: N-glycan processing6.22E-03
92GO:2000070: regulation of response to water deprivation6.22E-03
93GO:0050821: protein stabilization6.22E-03
94GO:0046686: response to cadmium ion6.92E-03
95GO:0016310: phosphorylation7.05E-03
96GO:0006002: fructose 6-phosphate metabolic process7.14E-03
97GO:0001558: regulation of cell growth7.14E-03
98GO:0007186: G-protein coupled receptor signaling pathway7.14E-03
99GO:0009657: plastid organization7.14E-03
100GO:0006888: ER to Golgi vesicle-mediated transport7.43E-03
101GO:0010112: regulation of systemic acquired resistance8.10E-03
102GO:0048589: developmental growth8.10E-03
103GO:0009817: defense response to fungus, incompatible interaction8.23E-03
104GO:0006952: defense response8.98E-03
105GO:0009407: toxin catabolic process9.09E-03
106GO:0043067: regulation of programmed cell death9.10E-03
107GO:0090332: stomatal closure9.10E-03
108GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway9.10E-03
109GO:0008202: steroid metabolic process9.10E-03
110GO:0009631: cold acclimation9.53E-03
111GO:0010043: response to zinc ion9.53E-03
112GO:0006896: Golgi to vacuole transport1.01E-02
113GO:0009870: defense response signaling pathway, resistance gene-dependent1.01E-02
114GO:0006032: chitin catabolic process1.01E-02
115GO:0043069: negative regulation of programmed cell death1.01E-02
116GO:0009089: lysine biosynthetic process via diaminopimelate1.12E-02
117GO:0072593: reactive oxygen species metabolic process1.12E-02
118GO:0000272: polysaccharide catabolic process1.12E-02
119GO:0008361: regulation of cell size1.24E-02
120GO:0016925: protein sumoylation1.24E-02
121GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.24E-02
122GO:0015031: protein transport1.29E-02
123GO:0051707: response to other organism1.35E-02
124GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process1.35E-02
125GO:0006626: protein targeting to mitochondrion1.35E-02
126GO:2000028: regulation of photoperiodism, flowering1.35E-02
127GO:0009718: anthocyanin-containing compound biosynthetic process1.35E-02
128GO:0009266: response to temperature stimulus1.48E-02
129GO:0006541: glutamine metabolic process1.48E-02
130GO:0009636: response to toxic substance1.52E-02
131GO:0010053: root epidermal cell differentiation1.60E-02
132GO:0009225: nucleotide-sugar metabolic process1.60E-02
133GO:0042343: indole glucosinolate metabolic process1.60E-02
134GO:0010039: response to iron ion1.60E-02
135GO:0071732: cellular response to nitric oxide1.60E-02
136GO:0070588: calcium ion transmembrane transport1.60E-02
137GO:0042538: hyperosmotic salinity response1.70E-02
138GO:0034976: response to endoplasmic reticulum stress1.73E-02
139GO:0006636: unsaturated fatty acid biosynthetic process1.73E-02
140GO:0009116: nucleoside metabolic process1.86E-02
141GO:0005992: trehalose biosynthetic process1.86E-02
142GO:0051302: regulation of cell division2.00E-02
143GO:0006874: cellular calcium ion homeostasis2.00E-02
144GO:0009735: response to cytokinin2.08E-02
145GO:0098542: defense response to other organism2.13E-02
146GO:0031408: oxylipin biosynthetic process2.13E-02
147GO:0051321: meiotic cell cycle2.13E-02
148GO:0016998: cell wall macromolecule catabolic process2.13E-02
149GO:0006468: protein phosphorylation2.14E-02
150GO:0010017: red or far-red light signaling pathway2.28E-02
151GO:2000022: regulation of jasmonic acid mediated signaling pathway2.28E-02
152GO:0030433: ubiquitin-dependent ERAD pathway2.28E-02
153GO:0080092: regulation of pollen tube growth2.28E-02
154GO:0071456: cellular response to hypoxia2.28E-02
155GO:0006012: galactose metabolic process2.42E-02
156GO:0071215: cellular response to abscisic acid stimulus2.42E-02
157GO:0009625: response to insect2.42E-02
158GO:0010227: floral organ abscission2.42E-02
159GO:0050832: defense response to fungus2.69E-02
160GO:0016117: carotenoid biosynthetic process2.72E-02
161GO:0045454: cell redox homeostasis2.84E-02
162GO:0010051: xylem and phloem pattern formation2.88E-02
163GO:0009960: endosperm development3.04E-02
164GO:0009958: positive gravitropism3.04E-02
165GO:0071472: cellular response to salt stress3.04E-02
166GO:0010183: pollen tube guidance3.36E-02
167GO:0009058: biosynthetic process3.43E-02
168GO:0009651: response to salt stress3.44E-02
169GO:0002229: defense response to oomycetes3.53E-02
170GO:0000302: response to reactive oxygen species3.53E-02
171GO:0009751: response to salicylic acid3.62E-02
172GO:0009630: gravitropism3.70E-02
173GO:0031047: gene silencing by RNA3.70E-02
174GO:0006511: ubiquitin-dependent protein catabolic process3.73E-02
175GO:0030163: protein catabolic process3.87E-02
176GO:0071281: cellular response to iron ion3.87E-02
177GO:0048364: root development3.88E-02
178GO:0006904: vesicle docking involved in exocytosis4.22E-02
179GO:0040008: regulation of growth4.28E-02
180GO:0000910: cytokinesis4.40E-02
181GO:0016579: protein deubiquitination4.40E-02
182GO:0001666: response to hypoxia4.58E-02
183GO:0009615: response to virus4.58E-02
184GO:0009816: defense response to bacterium, incompatible interaction4.77E-02
RankGO TermAdjusted P value
1GO:0019205: nucleobase-containing compound kinase activity0.00E+00
2GO:0051670: inulinase activity0.00E+00
3GO:0000224: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity0.00E+00
4GO:0008092: cytoskeletal protein binding0.00E+00
5GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
6GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity1.94E-05
7GO:0009916: alternative oxidase activity7.62E-05
8GO:0016301: kinase activity1.10E-04
9GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity2.33E-04
10GO:2001227: quercitrin binding3.50E-04
11GO:0051669: fructan beta-fructosidase activity3.50E-04
12GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity3.50E-04
13GO:0004633: phosphopantothenoylcysteine decarboxylase activity3.50E-04
14GO:0031219: levanase activity3.50E-04
15GO:2001147: camalexin binding3.50E-04
16GO:0010285: L,L-diaminopimelate aminotransferase activity3.50E-04
17GO:0009883: red or far-red light photoreceptor activity7.62E-04
18GO:0051879: Hsp90 protein binding7.62E-04
19GO:0052640: salicylic acid glucosyltransferase (glucoside-forming) activity7.62E-04
20GO:0008805: carbon-monoxide oxygenase activity7.62E-04
21GO:0008428: ribonuclease inhibitor activity7.62E-04
22GO:0004338: glucan exo-1,3-beta-glucosidase activity7.62E-04
23GO:0015117: thiosulfate transmembrane transporter activity7.62E-04
24GO:1901677: phosphate transmembrane transporter activity7.62E-04
25GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity7.62E-04
26GO:0004566: beta-glucuronidase activity7.62E-04
27GO:0004568: chitinase activity7.69E-04
28GO:0005524: ATP binding8.22E-04
29GO:0030247: polysaccharide binding1.02E-03
30GO:0046872: metal ion binding1.03E-03
31GO:0030246: carbohydrate binding1.08E-03
32GO:0005310: dicarboxylic acid transmembrane transporter activity1.23E-03
33GO:0015141: succinate transmembrane transporter activity1.23E-03
34GO:0008020: G-protein coupled photoreceptor activity1.23E-03
35GO:0004867: serine-type endopeptidase inhibitor activity1.44E-03
36GO:0004351: glutamate decarboxylase activity1.78E-03
37GO:0017077: oxidative phosphorylation uncoupler activity1.78E-03
38GO:0004749: ribose phosphate diphosphokinase activity1.78E-03
39GO:0019201: nucleotide kinase activity1.78E-03
40GO:0015131: oxaloacetate transmembrane transporter activity1.78E-03
41GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity1.78E-03
42GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides1.78E-03
43GO:0005509: calcium ion binding2.21E-03
44GO:0046527: glucosyltransferase activity2.38E-03
45GO:0004930: G-protein coupled receptor activity2.38E-03
46GO:0008948: oxaloacetate decarboxylase activity3.05E-03
47GO:0045300: acyl-[acyl-carrier-protein] desaturase activity3.05E-03
48GO:0004040: amidase activity3.05E-03
49GO:0031386: protein tag3.05E-03
50GO:0048040: UDP-glucuronate decarboxylase activity3.76E-03
51GO:0008474: palmitoyl-(protein) hydrolase activity3.76E-03
52GO:0004872: receptor activity4.07E-03
53GO:0070403: NAD+ binding4.54E-03
54GO:0004017: adenylate kinase activity4.54E-03
55GO:0004656: procollagen-proline 4-dioxygenase activity4.54E-03
56GO:0102425: myricetin 3-O-glucosyltransferase activity5.36E-03
57GO:0102360: daphnetin 3-O-glucosyltransferase activity5.36E-03
58GO:0009881: photoreceptor activity5.36E-03
59GO:0003872: 6-phosphofructokinase activity5.36E-03
60GO:0015140: malate transmembrane transporter activity5.36E-03
61GO:0043295: glutathione binding5.36E-03
62GO:0004620: phospholipase activity5.36E-03
63GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity5.61E-03
64GO:0004034: aldose 1-epimerase activity6.22E-03
65GO:0047893: flavonol 3-O-glucosyltransferase activity6.22E-03
66GO:0004525: ribonuclease III activity6.22E-03
67GO:0004708: MAP kinase kinase activity6.22E-03
68GO:0004674: protein serine/threonine kinase activity6.54E-03
69GO:0008142: oxysterol binding7.14E-03
70GO:0004630: phospholipase D activity7.14E-03
71GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity7.14E-03
72GO:0030170: pyridoxal phosphate binding7.50E-03
73GO:0016740: transferase activity1.00E-02
74GO:0030234: enzyme regulator activity1.01E-02
75GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity1.01E-02
76GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.05E-02
77GO:0047372: acylglycerol lipase activity1.12E-02
78GO:0008559: xenobiotic-transporting ATPase activity1.12E-02
79GO:0015116: sulfate transmembrane transporter activity1.24E-02
80GO:0004364: glutathione transferase activity1.30E-02
81GO:0000155: phosphorelay sensor kinase activity1.35E-02
82GO:0005388: calcium-transporting ATPase activity1.35E-02
83GO:0004565: beta-galactosidase activity1.35E-02
84GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.35E-02
85GO:0031624: ubiquitin conjugating enzyme binding1.48E-02
86GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.48E-02
87GO:0008061: chitin binding1.60E-02
88GO:0003712: transcription cofactor activity1.60E-02
89GO:0004970: ionotropic glutamate receptor activity1.60E-02
90GO:0005217: intracellular ligand-gated ion channel activity1.60E-02
91GO:0031418: L-ascorbic acid binding1.86E-02
92GO:0001046: core promoter sequence-specific DNA binding1.86E-02
93GO:0043531: ADP binding1.94E-02
94GO:0031625: ubiquitin protein ligase binding2.02E-02
95GO:0035251: UDP-glucosyltransferase activity2.13E-02
96GO:0036459: thiol-dependent ubiquitinyl hydrolase activity2.13E-02
97GO:0045735: nutrient reservoir activity2.16E-02
98GO:0080043: quercetin 3-O-glucosyltransferase activity2.38E-02
99GO:0080044: quercetin 7-O-glucosyltransferase activity2.38E-02
100GO:0008810: cellulase activity2.42E-02
101GO:0003756: protein disulfide isomerase activity2.57E-02
102GO:0003727: single-stranded RNA binding2.57E-02
103GO:0015035: protein disulfide oxidoreductase activity2.68E-02
104GO:0047134: protein-disulfide reductase activity2.72E-02
105GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen3.13E-02
106GO:0004791: thioredoxin-disulfide reductase activity3.20E-02
107GO:0016853: isomerase activity3.20E-02
108GO:0010181: FMN binding3.20E-02
109GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen3.34E-02
110GO:0004843: thiol-dependent ubiquitin-specific protease activity3.53E-02
111GO:0003924: GTPase activity3.68E-02
112GO:0008483: transaminase activity4.22E-02
113GO:0005516: calmodulin binding4.32E-02
114GO:0051213: dioxygenase activity4.58E-02
115GO:0008375: acetylglucosaminyltransferase activity4.95E-02
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Gene type



Gene DE type