co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G48020

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
2	GO:0031930: mitochondria-nucleus signaling pathway	3.64E-05
3	GO:1902065: response to L-glutamate	1.08E-04
4	GO:0032491: detection of molecule of fungal origin	1.08E-04
5	GO:0034975: protein folding in endoplasmic reticulum	1.08E-04
6	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	1.08E-04
7	GO:0009727: detection of ethylene stimulus	2.52E-04
8	GO:0019725: cellular homeostasis	2.52E-04
9	GO:0080183: response to photooxidative stress	2.52E-04
10	GO:0009812: flavonoid metabolic process	2.52E-04
11	GO:0002240: response to molecule of oomycetes origin	2.52E-04
12	GO:0045732: positive regulation of protein catabolic process	2.52E-04
13	GO:0009266: response to temperature stimulus	2.55E-04
14	GO:0009738: abscisic acid-activated signaling pathway	3.47E-04
15	GO:0061158: 3'-UTR-mediated mRNA destabilization	4.19E-04
16	GO:0045836: positive regulation of meiotic nuclear division	4.19E-04
17	GO:0009306: protein secretion	5.60E-04
18	GO:0022622: root system development	7.98E-04
19	GO:0030041: actin filament polymerization	1.01E-03
20	GO:0009247: glycolipid biosynthetic process	1.01E-03
21	GO:0045927: positive regulation of growth	1.01E-03
22	GO:0006904: vesicle docking involved in exocytosis	1.09E-03
23	GO:0002238: response to molecule of fungal origin	1.23E-03
24	GO:0001731: formation of translation preinitiation complex	1.23E-03
25	GO:0048317: seed morphogenesis	1.23E-03
26	GO:0045962: positive regulation of development, heterochronic	1.23E-03
27	GO:1900057: positive regulation of leaf senescence	1.73E-03
28	GO:0046470: phosphatidylcholine metabolic process	1.73E-03
29	GO:0019375: galactolipid biosynthetic process	2.00E-03
30	GO:0045010: actin nucleation	2.00E-03
31	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.00E-03
32	GO:0010204: defense response signaling pathway, resistance gene-independent	2.28E-03
33	GO:0030042: actin filament depolymerization	2.88E-03
34	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	2.88E-03
35	GO:0016192: vesicle-mediated transport	2.89E-03
36	GO:0031347: regulation of defense response	3.08E-03
37	GO:0009089: lysine biosynthetic process via diaminopimelate	3.53E-03
38	GO:0045037: protein import into chloroplast stroma	3.87E-03
39	GO:0006626: protein targeting to mitochondrion	4.23E-03
40	GO:0018107: peptidyl-threonine phosphorylation	4.23E-03
41	GO:0006446: regulation of translational initiation	4.59E-03
42	GO:0002237: response to molecule of bacterial origin	4.59E-03
43	GO:0070588: calcium ion transmembrane transport	4.96E-03
44	GO:0009901: anther dehiscence	4.96E-03
45	GO:0018105: peptidyl-serine phosphorylation	5.01E-03
46	GO:0006396: RNA processing	5.01E-03
47	GO:0080147: root hair cell development	5.75E-03
48	GO:0009863: salicylic acid mediated signaling pathway	5.75E-03
49	GO:0045333: cellular respiration	5.75E-03
50	GO:0051321: meiotic cell cycle	6.56E-03
51	GO:0009845: seed germination	6.58E-03
52	GO:0031348: negative regulation of defense response	6.99E-03
53	GO:0071369: cellular response to ethylene stimulus	7.42E-03
54	GO:0010150: leaf senescence	8.39E-03
55	GO:0009960: endosperm development	9.26E-03
56	GO:0030163: protein catabolic process	1.18E-02
57	GO:0006464: cellular protein modification process	1.23E-02
58	GO:0051607: defense response to virus	1.34E-02
59	GO:0010029: regulation of seed germination	1.45E-02
60	GO:0045892: negative regulation of transcription, DNA-templated	1.97E-02
61	GO:0045087: innate immune response	1.99E-02
62	GO:0006887: exocytosis	2.25E-02
63	GO:0006897: endocytosis	2.25E-02
64	GO:0009965: leaf morphogenesis	2.59E-02
65	GO:0008152: metabolic process	2.64E-02
66	GO:0009846: pollen germination	2.80E-02
67	GO:0042538: hyperosmotic salinity response	2.80E-02
68	GO:0006486: protein glycosylation	2.94E-02
69	GO:0015031: protein transport	3.03E-02
70	GO:0006857: oligopeptide transport	3.09E-02
71	GO:0009620: response to fungus	3.55E-02
72	GO:0042545: cell wall modification	3.70E-02
73	GO:0009735: response to cytokinin	3.87E-02
74	GO:0035556: intracellular signal transduction	4.46E-02

Rank	GO Term	Adjusted P value
1	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
2	GO:0005212: structural constituent of eye lens	0.00E+00
3	GO:0046481: digalactosyldiacylglycerol synthase activity	1.08E-04
4	GO:0010285: L,L-diaminopimelate aminotransferase activity	1.08E-04
5	GO:0052640: salicylic acid glucosyltransferase (glucoside-forming) activity	2.52E-04
6	GO:0035250: UDP-galactosyltransferase activity	6.01E-04
7	GO:0046527: glucosyltransferase activity	7.98E-04
8	GO:0009916: alternative oxidase activity	7.98E-04
9	GO:0008641: small protein activating enzyme activity	1.01E-03
10	GO:0004040: amidase activity	1.01E-03
11	GO:0005509: calcium ion binding	1.11E-03
12	GO:0008194: UDP-glycosyltransferase activity	1.37E-03
13	GO:0003730: mRNA 3'-UTR binding	1.47E-03
14	GO:0004656: procollagen-proline 4-dioxygenase activity	1.47E-03
15	GO:0004525: ribonuclease III activity	2.00E-03
16	GO:0004630: phospholipase D activity	2.28E-03
17	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	2.28E-03
18	GO:0005543: phospholipid binding	3.53E-03
19	GO:0015198: oligopeptide transporter activity	3.87E-03
20	GO:0008378: galactosyltransferase activity	3.87E-03
21	GO:0005388: calcium-transporting ATPase activity	4.23E-03
22	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	4.23E-03
23	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.44E-03
24	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.44E-03
25	GO:0003779: actin binding	4.72E-03
26	GO:0015035: protein disulfide oxidoreductase activity	5.01E-03
27	GO:0031418: L-ascorbic acid binding	5.75E-03
28	GO:0051087: chaperone binding	6.15E-03
29	GO:0004707: MAP kinase activity	6.56E-03
30	GO:0003756: protein disulfide isomerase activity	7.87E-03
31	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.18E-02
32	GO:0008483: transaminase activity	1.28E-02
33	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.28E-02
34	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.51E-02
35	GO:0005516: calmodulin binding	1.54E-02
36	GO:0004683: calmodulin-dependent protein kinase activity	1.56E-02
37	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.68E-02
38	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.99E-02
39	GO:0044212: transcription regulatory region DNA binding	2.25E-02
40	GO:0051537: 2 iron, 2 sulfur cluster binding	2.52E-02
41	GO:0016301: kinase activity	2.89E-02
42	GO:0045330: aspartyl esterase activity	3.17E-02
43	GO:0016874: ligase activity	3.63E-02
44	GO:0030599: pectinesterase activity	3.63E-02
45	GO:0022857: transmembrane transporter activity	3.63E-02
46	GO:0016758: transferase activity, transferring hexosyl groups	4.35E-02
47	GO:0030170: pyridoxal phosphate binding	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0043231: intracellular membrane-bounded organelle	9.20E-04
2	GO:0016282: eukaryotic 43S preinitiation complex	1.23E-03
3	GO:0033290: eukaryotic 48S preinitiation complex	1.47E-03
4	GO:0070469: respiratory chain	6.15E-03
5	GO:0009524: phragmoplast	6.41E-03
6	GO:0015629: actin cytoskeleton	7.42E-03
7	GO:0000145: exocyst	1.12E-02
8	GO:0071944: cell periphery	1.18E-02
9	GO:0009707: chloroplast outer membrane	1.68E-02
10	GO:0016020: membrane	1.77E-02
11	GO:0031902: late endosome membrane	2.25E-02
12	GO:0090406: pollen tube	2.38E-02
13	GO:0005856: cytoskeleton	2.59E-02
14	GO:0005737: cytoplasm	3.07E-02
15	GO:0000139: Golgi membrane	3.28E-02
16	GO:0010008: endosome membrane	3.39E-02
17	GO:0009706: chloroplast inner membrane	3.78E-02
18	GO:0005789: endoplasmic reticulum membrane	3.80E-02
19	GO:0005654: nucleoplasm	4.35E-02
20	GO:0009543: chloroplast thylakoid lumen	4.44E-02