Gene: AT3G47500
     

Gene description


TAIR ID: AT3G47500

Short description: cycling DOF factor 3

Pathogen responsiveness: 0.80

General responsiveness: -0.19

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G138455  

Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, flower development, transcription


GO cellular component


nucleus


GO molecular function


transcription factor activity, sequence-specific DNA binding, metal ion binding, protein binding, DNA binding


Protein domain


PfamPF02701, Dof domain, zinc finger

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G24260, AT5G41315

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


22 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE13739Col, WT, control 0 hCol, WT, G.orontii 6 h-2.954.91E-10
GSE13739Col, eds, control 0 hCol, eds, G.orontii 6 h-2.898.75E-10
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.332.45E-09
GSE2169Col, rre2, waterCol, rre2, chitin 30 min-1.813.16E-07
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h-3.971.56E-13
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h-6.071.48E-17
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h-3.714.64E-13
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h-5.675.44E-17
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.501.18E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-4.354.51E-16
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-1.815.76E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-4.801.33E-16
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.971.68E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.378.33E-13
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-1.581.25E-09
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.504.56E-04
GSE5520Col, WT, control 10 hCol, WT, Cor- hrpS- 10 h-2.291.11E-02
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.711.87E-09
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-2.052.03E-12
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-2.939.61E-04
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h-1.671.49E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h-1.731.37E-02






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.