gene detail

Gene description

TAIR ID: AT3G46440

Short description: UDP-XYL synthase 5

Pathogen responsiveness: -0.82

General responsiveness: 0.79

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

UDP-D-xylose biosynthetic process, D-xylose metabolic process, nucleotide-sugar metabolic process

GO cellular component

cytosol, plasma membrane

GO molecular function

UDP-glucuronate decarboxylase activity, NAD+ binding, catalytic activity

Protein domain

Pfam	PF16363, GDP-mannose 4,6 dehydratase

Metabolic pathway

KEGG pathway

PATH:ath00520: Amino sugar and nucleotide sugar metabolism

Transcriptional regulation

Regulator:
AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

Coexpression network

Differentially expressed condition

13 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	2.00	8.88E-07
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	1.55	1.13E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	2.54	1.48E-10
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	1.72	2.83E-09
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	1.64	7.39E-09
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.90	2.88E-10
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	1.97	9.32E-15
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	1.56	2.98E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	1.52	3.30E-13
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	1.92	1.22E-14
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	1.85	6.59E-03
GSE6556	Col, WT, control	Col, WT, PstDC3000 AvrRpt2 48 h	1.51	9.25E-04
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	2.70	1.84E-06