Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G46440

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0002084: protein depalmitoylation0.00E+00
2GO:0010055: atrichoblast differentiation0.00E+00
3GO:0010401: pectic galactan metabolic process0.00E+00
4GO:0046865: terpenoid transport0.00E+00
5GO:0072722: response to amitrole0.00E+00
6GO:0034756: regulation of iron ion transport0.00E+00
7GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
8GO:0046686: response to cadmium ion9.69E-06
9GO:0009814: defense response, incompatible interaction2.00E-05
10GO:0010104: regulation of ethylene-activated signaling pathway5.73E-05
11GO:0071369: cellular response to ethylene stimulus3.57E-04
12GO:1900056: negative regulation of leaf senescence3.88E-04
13GO:0009700: indole phytoalexin biosynthetic process4.13E-04
14GO:0016337: single organismal cell-cell adhesion4.13E-04
15GO:0007292: female gamete generation4.13E-04
16GO:0032107: regulation of response to nutrient levels4.13E-04
17GO:0009623: response to parasitic fungus4.13E-04
18GO:0015760: glucose-6-phosphate transport4.13E-04
19GO:0035266: meristem growth4.13E-04
20GO:0042964: thioredoxin reduction4.13E-04
21GO:0006680: glucosylceramide catabolic process4.13E-04
22GO:0099132: ATP hydrolysis coupled cation transmembrane transport4.13E-04
23GO:1900384: regulation of flavonol biosynthetic process4.13E-04
24GO:0001558: regulation of cell growth5.92E-04
25GO:0006623: protein targeting to vacuole6.51E-04
26GO:0090332: stomatal closure8.37E-04
27GO:0009156: ribonucleoside monophosphate biosynthetic process8.93E-04
28GO:0051788: response to misfolded protein8.93E-04
29GO:0006024: glycosaminoglycan biosynthetic process8.93E-04
30GO:0080183: response to photooxidative stress8.93E-04
31GO:0015709: thiosulfate transport8.93E-04
32GO:1902066: regulation of cell wall pectin metabolic process8.93E-04
33GO:0048569: post-embryonic animal organ development8.93E-04
34GO:0015712: hexose phosphate transport8.93E-04
35GO:0071422: succinate transmembrane transport8.93E-04
36GO:0046939: nucleotide phosphorylation8.93E-04
37GO:0080151: positive regulation of salicylic acid mediated signaling pathway8.93E-04
38GO:0052541: plant-type cell wall cellulose metabolic process8.93E-04
39GO:0008535: respiratory chain complex IV assembly8.93E-04
40GO:0019725: cellular homeostasis8.93E-04
41GO:0042853: L-alanine catabolic process8.93E-04
42GO:0051252: regulation of RNA metabolic process8.93E-04
43GO:0015012: heparan sulfate proteoglycan biosynthetic process8.93E-04
44GO:0009615: response to virus1.13E-03
45GO:0006790: sulfur compound metabolic process1.28E-03
46GO:0009627: systemic acquired resistance1.29E-03
47GO:0080168: abscisic acid transport1.45E-03
48GO:0048586: regulation of long-day photoperiodism, flowering1.45E-03
49GO:0032922: circadian regulation of gene expression1.45E-03
50GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process1.45E-03
51GO:0071367: cellular response to brassinosteroid stimulus1.45E-03
52GO:0006788: heme oxidation1.45E-03
53GO:0010272: response to silver ion1.45E-03
54GO:0015692: lead ion transport1.45E-03
55GO:0045836: positive regulation of meiotic nuclear division1.45E-03
56GO:0010186: positive regulation of cellular defense response1.45E-03
57GO:0006517: protein deglycosylation1.45E-03
58GO:1901672: positive regulation of systemic acquired resistance1.45E-03
59GO:0055074: calcium ion homeostasis1.45E-03
60GO:0060968: regulation of gene silencing1.45E-03
61GO:0061158: 3'-UTR-mediated mRNA destabilization1.45E-03
62GO:0017006: protein-tetrapyrrole linkage1.45E-03
63GO:0035436: triose phosphate transmembrane transport1.45E-03
64GO:0010253: UDP-rhamnose biosynthetic process1.45E-03
65GO:0051176: positive regulation of sulfur metabolic process1.45E-03
66GO:0015714: phosphoenolpyruvate transport1.45E-03
67GO:0009407: toxin catabolic process1.78E-03
68GO:0046854: phosphatidylinositol phosphorylation1.83E-03
69GO:0016310: phosphorylation1.95E-03
70GO:0032877: positive regulation of DNA endoreduplication2.10E-03
71GO:0055089: fatty acid homeostasis2.10E-03
72GO:0000187: activation of MAPK activity2.10E-03
73GO:0070301: cellular response to hydrogen peroxide2.10E-03
74GO:0010731: protein glutathionylation2.10E-03
75GO:0015729: oxaloacetate transport2.10E-03
76GO:0009584: detection of visible light2.10E-03
77GO:0072334: UDP-galactose transmembrane transport2.10E-03
78GO:0006874: cellular calcium ion homeostasis2.50E-03
79GO:0016998: cell wall macromolecule catabolic process2.75E-03
80GO:0060548: negative regulation of cell death2.82E-03
81GO:0009165: nucleotide biosynthetic process2.82E-03
82GO:0015713: phosphoglycerate transport2.82E-03
83GO:0010109: regulation of photosynthesis2.82E-03
84GO:0006536: glutamate metabolic process2.82E-03
85GO:0010363: regulation of plant-type hypersensitive response2.82E-03
86GO:0051707: response to other organism2.95E-03
87GO:0030433: ubiquitin-dependent ERAD pathway3.01E-03
88GO:0009636: response to toxic substance3.42E-03
89GO:0009435: NAD biosynthetic process3.61E-03
90GO:0006665: sphingolipid metabolic process3.61E-03
91GO:0071423: malate transmembrane transport3.61E-03
92GO:0098719: sodium ion import across plasma membrane3.61E-03
93GO:0046283: anthocyanin-containing compound metabolic process3.61E-03
94GO:0045927: positive regulation of growth3.61E-03
95GO:0007166: cell surface receptor signaling pathway3.69E-03
96GO:0042147: retrograde transport, endosome to Golgi3.87E-03
97GO:0010315: auxin efflux4.47E-03
98GO:0060918: auxin transport4.47E-03
99GO:0010264: myo-inositol hexakisphosphate biosynthetic process4.47E-03
100GO:0006139: nucleobase-containing compound metabolic process4.47E-03
101GO:0048232: male gamete generation4.47E-03
102GO:0048827: phyllome development4.47E-03
103GO:0035435: phosphate ion transmembrane transport4.47E-03
104GO:0043248: proteasome assembly4.47E-03
105GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity4.47E-03
106GO:0009643: photosynthetic acclimation4.47E-03
107GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly4.47E-03
108GO:0042176: regulation of protein catabolic process4.47E-03
109GO:0048544: recognition of pollen4.85E-03
110GO:0010183: pollen tube guidance5.21E-03
111GO:0048280: vesicle fusion with Golgi apparatus5.38E-03
112GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response5.38E-03
113GO:0006891: intra-Golgi vesicle-mediated transport5.58E-03
114GO:0080027: response to herbivore6.36E-03
115GO:2000014: regulation of endosperm development6.36E-03
116GO:0015937: coenzyme A biosynthetic process6.36E-03
117GO:0008272: sulfate transport6.36E-03
118GO:0007050: cell cycle arrest6.36E-03
119GO:0000122: negative regulation of transcription from RNA polymerase II promoter6.36E-03
120GO:0009610: response to symbiotic fungus6.36E-03
121GO:0080186: developmental vegetative growth6.36E-03
122GO:0051510: regulation of unidimensional cell growth6.36E-03
123GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline7.40E-03
124GO:0009819: drought recovery7.40E-03
125GO:0006491: N-glycan processing7.40E-03
126GO:0010078: maintenance of root meristem identity7.40E-03
127GO:2000070: regulation of response to water deprivation7.40E-03
128GO:0051607: defense response to virus7.63E-03
129GO:0009657: plastid organization8.49E-03
130GO:0010120: camalexin biosynthetic process8.49E-03
131GO:0006002: fructose 6-phosphate metabolic process8.49E-03
132GO:0019430: removal of superoxide radicals8.49E-03
133GO:0015780: nucleotide-sugar transport9.65E-03
134GO:0010112: regulation of systemic acquired resistance9.65E-03
135GO:0008219: cell death1.06E-02
136GO:0045454: cell redox homeostasis1.07E-02
137GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.09E-02
138GO:0051453: regulation of intracellular pH1.09E-02
139GO:0008202: steroid metabolic process1.09E-02
140GO:0048268: clathrin coat assembly1.09E-02
141GO:0043069: negative regulation of programmed cell death1.21E-02
142GO:0048829: root cap development1.21E-02
143GO:0009870: defense response signaling pathway, resistance gene-dependent1.21E-02
144GO:0006032: chitin catabolic process1.21E-02
145GO:0051555: flavonol biosynthetic process1.21E-02
146GO:0006896: Golgi to vacuole transport1.21E-02
147GO:0009631: cold acclimation1.22E-02
148GO:0042742: defense response to bacterium1.32E-02
149GO:0010015: root morphogenesis1.34E-02
150GO:0009089: lysine biosynthetic process via diaminopimelate1.34E-02
151GO:0045087: innate immune response1.34E-02
152GO:0072593: reactive oxygen species metabolic process1.34E-02
153GO:0000272: polysaccharide catabolic process1.34E-02
154GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.48E-02
155GO:0008361: regulation of cell size1.48E-02
156GO:0016925: protein sumoylation1.48E-02
157GO:0006897: endocytosis1.60E-02
158GO:2000028: regulation of photoperiodism, flowering1.62E-02
159GO:0055046: microgametogenesis1.62E-02
160GO:0006626: protein targeting to mitochondrion1.62E-02
161GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process1.62E-02
162GO:0055114: oxidation-reduction process1.74E-02
163GO:0009933: meristem structural organization1.76E-02
164GO:0009266: response to temperature stimulus1.76E-02
165GO:0006541: glutamine metabolic process1.76E-02
166GO:0009225: nucleotide-sugar metabolic process1.91E-02
167GO:0010039: response to iron ion1.91E-02
168GO:0010053: root epidermal cell differentiation1.91E-02
169GO:0071732: cellular response to nitric oxide1.91E-02
170GO:0042343: indole glucosinolate metabolic process1.91E-02
171GO:0090351: seedling development1.91E-02
172GO:0070588: calcium ion transmembrane transport1.91E-02
173GO:0006468: protein phosphorylation1.99E-02
174GO:0034976: response to endoplasmic reticulum stress2.06E-02
175GO:0006636: unsaturated fatty acid biosynthetic process2.06E-02
176GO:0015031: protein transport2.09E-02
177GO:0009116: nucleoside metabolic process2.22E-02
178GO:0051302: regulation of cell division2.38E-02
179GO:0043622: cortical microtubule organization2.38E-02
180GO:0007017: microtubule-based process2.38E-02
181GO:0031408: oxylipin biosynthetic process2.55E-02
182GO:0051321: meiotic cell cycle2.55E-02
183GO:0098542: defense response to other organism2.55E-02
184GO:0016226: iron-sulfur cluster assembly2.72E-02
185GO:0080092: regulation of pollen tube growth2.72E-02
186GO:0071456: cellular response to hypoxia2.72E-02
187GO:2000022: regulation of jasmonic acid mediated signaling pathway2.72E-02
188GO:0010017: red or far-red light signaling pathway2.72E-02
189GO:0071215: cellular response to abscisic acid stimulus2.89E-02
190GO:0009625: response to insect2.89E-02
191GO:0010227: floral organ abscission2.89E-02
192GO:0006012: galactose metabolic process2.89E-02
193GO:0009626: plant-type hypersensitive response2.96E-02
194GO:0042127: regulation of cell proliferation3.07E-02
195GO:0016117: carotenoid biosynthetic process3.25E-02
196GO:0010051: xylem and phloem pattern formation3.44E-02
197GO:0010087: phloem or xylem histogenesis3.44E-02
198GO:0034220: ion transmembrane transport3.44E-02
199GO:0008360: regulation of cell shape3.63E-02
200GO:0048868: pollen tube development3.63E-02
201GO:0009960: endosperm development3.63E-02
202GO:0006814: sodium ion transport3.82E-02
203GO:0009749: response to glucose4.01E-02
204GO:0002229: defense response to oomycetes4.21E-02
205GO:0010193: response to ozone4.21E-02
206GO:0009058: biosynthetic process4.39E-02
207GO:0009630: gravitropism4.41E-02
208GO:0050832: defense response to fungus4.43E-02
209GO:0071281: cellular response to iron ion4.62E-02
210GO:0030163: protein catabolic process4.62E-02
211GO:0009567: double fertilization forming a zygote and endosperm4.83E-02
212GO:0006914: autophagy4.83E-02
213GO:0009751: response to salicylic acid4.91E-02
RankGO TermAdjusted P value
1GO:0051766: inositol trisphosphate kinase activity0.00E+00
2GO:0051765: inositol tetrakisphosphate kinase activity0.00E+00
3GO:0044318: L-aspartate:fumarate oxidoreductase activity0.00E+00
4GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
5GO:0018580: nitronate monooxygenase activity0.00E+00
6GO:0019205: nucleobase-containing compound kinase activity0.00E+00
7GO:0008734: L-aspartate oxidase activity0.00E+00
8GO:0051670: inulinase activity0.00E+00
9GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity2.63E-05
10GO:0016301: kinase activity6.99E-05
11GO:0009916: alternative oxidase activity1.01E-04
12GO:0030247: polysaccharide binding1.82E-04
13GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity3.00E-04
14GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity4.13E-04
15GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity4.13E-04
16GO:0047326: inositol tetrakisphosphate 5-kinase activity4.13E-04
17GO:2001227: quercitrin binding4.13E-04
18GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity4.13E-04
19GO:0048037: cofactor binding4.13E-04
20GO:0000824: inositol tetrakisphosphate 3-kinase activity4.13E-04
21GO:0004348: glucosylceramidase activity4.13E-04
22GO:0004633: phosphopantothenoylcysteine decarboxylase activity4.13E-04
23GO:0019786: Atg8-specific protease activity4.13E-04
24GO:0031219: levanase activity4.13E-04
25GO:2001147: camalexin binding4.13E-04
26GO:0051669: fructan beta-fructosidase activity4.13E-04
27GO:0010285: L,L-diaminopimelate aminotransferase activity4.13E-04
28GO:0016853: isomerase activity5.95E-04
29GO:0005524: ATP binding6.44E-04
30GO:0004775: succinate-CoA ligase (ADP-forming) activity8.93E-04
31GO:0004566: beta-glucuronidase activity8.93E-04
32GO:0008428: ribonuclease inhibitor activity8.93E-04
33GO:0010280: UDP-L-rhamnose synthase activity8.93E-04
34GO:0019779: Atg8 activating enzyme activity8.93E-04
35GO:0050377: UDP-glucose 4,6-dehydratase activity8.93E-04
36GO:0009883: red or far-red light photoreceptor activity8.93E-04
37GO:0008460: dTDP-glucose 4,6-dehydratase activity8.93E-04
38GO:0015117: thiosulfate transmembrane transporter activity8.93E-04
39GO:0004338: glucan exo-1,3-beta-glucosidase activity8.93E-04
40GO:0015152: glucose-6-phosphate transmembrane transporter activity8.93E-04
41GO:1901677: phosphate transmembrane transporter activity8.93E-04
42GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity8.93E-04
43GO:0008805: carbon-monoxide oxygenase activity8.93E-04
44GO:0004776: succinate-CoA ligase (GDP-forming) activity8.93E-04
45GO:0046872: metal ion binding9.54E-04
46GO:0004568: chitinase activity9.73E-04
47GO:0008559: xenobiotic-transporting ATPase activity1.12E-03
48GO:0022857: transmembrane transporter activity1.19E-03
49GO:0015141: succinate transmembrane transporter activity1.45E-03
50GO:0071917: triose-phosphate transmembrane transporter activity1.45E-03
51GO:0008020: G-protein coupled photoreceptor activity1.45E-03
52GO:0043169: cation binding1.45E-03
53GO:0005310: dicarboxylic acid transmembrane transporter activity1.45E-03
54GO:0004867: serine-type endopeptidase inhibitor activity1.83E-03
55GO:0008061: chitin binding1.83E-03
56GO:0005217: intracellular ligand-gated ion channel activity1.83E-03
57GO:0004970: ionotropic glutamate receptor activity1.83E-03
58GO:0035529: NADH pyrophosphatase activity2.10E-03
59GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity2.10E-03
60GO:0004749: ribose phosphate diphosphokinase activity2.10E-03
61GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity2.10E-03
62GO:0004351: glutamate decarboxylase activity2.10E-03
63GO:0019201: nucleotide kinase activity2.10E-03
64GO:0017077: oxidative phosphorylation uncoupler activity2.10E-03
65GO:0015131: oxaloacetate transmembrane transporter activity2.10E-03
66GO:0035251: UDP-glucosyltransferase activity2.75E-03
67GO:0004364: glutathione transferase activity2.80E-03
68GO:0015120: phosphoglycerate transmembrane transporter activity2.82E-03
69GO:0019776: Atg8 ligase activity2.82E-03
70GO:0004392: heme oxygenase (decyclizing) activity2.82E-03
71GO:0008948: oxaloacetate decarboxylase activity3.61E-03
72GO:0045300: acyl-[acyl-carrier-protein] desaturase activity3.61E-03
73GO:0004040: amidase activity3.61E-03
74GO:0005459: UDP-galactose transmembrane transporter activity3.61E-03
75GO:0031386: protein tag3.61E-03
76GO:0047631: ADP-ribose diphosphatase activity3.61E-03
77GO:0031593: polyubiquitin binding4.47E-03
78GO:0000210: NAD+ diphosphatase activity4.47E-03
79GO:0008474: palmitoyl-(protein) hydrolase activity4.47E-03
80GO:0036402: proteasome-activating ATPase activity4.47E-03
81GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity4.47E-03
82GO:0004791: thioredoxin-disulfide reductase activity4.85E-03
83GO:0016740: transferase activity4.92E-03
84GO:0004872: receptor activity5.21E-03
85GO:0051020: GTPase binding5.38E-03
86GO:0004017: adenylate kinase activity5.38E-03
87GO:0004656: procollagen-proline 4-dioxygenase activity5.38E-03
88GO:0015631: tubulin binding5.38E-03
89GO:0003872: 6-phosphofructokinase activity6.36E-03
90GO:0015140: malate transmembrane transporter activity6.36E-03
91GO:0005338: nucleotide-sugar transmembrane transporter activity6.36E-03
92GO:0102425: myricetin 3-O-glucosyltransferase activity6.36E-03
93GO:0102360: daphnetin 3-O-glucosyltransferase activity6.36E-03
94GO:0043295: glutathione binding6.36E-03
95GO:0009881: photoreceptor activity6.36E-03
96GO:0004620: phospholipase activity6.36E-03
97GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity7.19E-03
98GO:0047893: flavonol 3-O-glucosyltransferase activity7.40E-03
99GO:0005544: calcium-dependent phospholipid binding7.40E-03
100GO:0004525: ribonuclease III activity7.40E-03
101GO:0004034: aldose 1-epimerase activity7.40E-03
102GO:0004708: MAP kinase kinase activity7.40E-03
103GO:0051213: dioxygenase activity8.09E-03
104GO:0008142: oxysterol binding8.49E-03
105GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen9.33E-03
106GO:0030170: pyridoxal phosphate binding1.03E-02
107GO:0031490: chromatin DNA binding1.09E-02
108GO:0005509: calcium ion binding1.13E-02
109GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity1.21E-02
110GO:0005545: 1-phosphatidylinositol binding1.21E-02
111GO:0008047: enzyme activator activity1.21E-02
112GO:0030234: enzyme regulator activity1.21E-02
113GO:0004674: protein serine/threonine kinase activity1.28E-02
114GO:0015297: antiporter activity1.28E-02
115GO:0015386: potassium:proton antiporter activity1.34E-02
116GO:0047372: acylglycerol lipase activity1.34E-02
117GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.34E-02
118GO:0015116: sulfate transmembrane transporter activity1.48E-02
119GO:0004565: beta-galactosidase activity1.62E-02
120GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.62E-02
121GO:0000155: phosphorelay sensor kinase activity1.62E-02
122GO:0005388: calcium-transporting ATPase activity1.62E-02
123GO:0005315: inorganic phosphate transmembrane transporter activity1.62E-02
124GO:0031624: ubiquitin conjugating enzyme binding1.76E-02
125GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.76E-02
126GO:0042626: ATPase activity, coupled to transmembrane movement of substances1.85E-02
127GO:0017025: TBP-class protein binding1.91E-02
128GO:0003712: transcription cofactor activity1.91E-02
129GO:0004190: aspartic-type endopeptidase activity1.91E-02
130GO:0005516: calmodulin binding2.21E-02
131GO:0001046: core promoter sequence-specific DNA binding2.22E-02
132GO:0043130: ubiquitin binding2.22E-02
133GO:0031418: L-ascorbic acid binding2.22E-02
134GO:0036459: thiol-dependent ubiquitinyl hydrolase activity2.55E-02
135GO:0004540: ribonuclease activity2.55E-02
136GO:0031625: ubiquitin protein ligase binding2.60E-02
137GO:0008810: cellulase activity2.89E-02
138GO:0003727: single-stranded RNA binding3.07E-02
139GO:0003756: protein disulfide isomerase activity3.07E-02
140GO:0004497: monooxygenase activity3.10E-02
141GO:0020037: heme binding3.12E-02
142GO:0047134: protein-disulfide reductase activity3.25E-02
143GO:0005506: iron ion binding3.53E-02
144GO:0001085: RNA polymerase II transcription factor binding3.63E-02
145GO:0030276: clathrin binding3.63E-02
146GO:0010181: FMN binding3.82E-02
147GO:0004843: thiol-dependent ubiquitin-specific protease activity4.21E-02
148GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen4.25E-02
149GO:0015385: sodium:proton antiporter activity4.62E-02
150GO:0003924: GTPase activity4.99E-02
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Gene type



Gene DE type