Gene: AT3G46080
     

Gene description


TAIR ID: AT3G46080

Short description: C2H2-type zinc finger family protein

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat:

TAAFFX.130052.2.S1_AT  TA.13474.1.S1_AT  TAAFFX.32426.1.S1_AT  TAAFFX.32426.1.S1_X_AT  


GO biological process


regulation of transcription, DNA-templated, response to chitin, transcription


GO cellular component


nucleus


GO molecular function


transcription factor activity, sequence-specific DNA binding, metal ion binding, nucleic acid binding


Protein domain


PfamPF13912, C2H2-type zinc finger
SMARTSM00355, ZnF_C2H2

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G11260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


17 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Di2, WT, controlDi2, WT, TEV 21 d1.623.22E-02
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d3.042.80E-06
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d2.251.92E-04
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt21.688.58E-05
GSE40544Col, WT, controlCol, WT, PstDC3000 EV1.697.24E-05
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt21.833.91E-05
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h6.987.54E-18
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h4.637.63E-15
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h6.532.08E-17
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h6.691.11E-17
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h6.808.86E-18
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h7.881.99E-18
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h5.932.55E-13
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h5.825.17E-13
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h7.265.96E-15
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h5.785.81E-13
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_24 h2.121.19E-04






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