co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G46080

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:2000378: negative regulation of reactive oxygen species metabolic process	0.00E+00
2	GO:0002376: immune system process	0.00E+00
3	GO:1902009: positive regulation of toxin transport	0.00E+00
4	GO:0010324: membrane invagination	0.00E+00
5	GO:0071327: cellular response to trehalose stimulus	0.00E+00
6	GO:0043048: dolichyl monophosphate biosynthetic process	0.00E+00
7	GO:1902289: negative regulation of defense response to oomycetes	0.00E+00
8	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
9	GO:1900367: positive regulation of defense response to insect	0.00E+00
10	GO:0010200: response to chitin	4.38E-12
11	GO:0009617: response to bacterium	2.31E-07
12	GO:0060548: negative regulation of cell death	1.07E-06
13	GO:0009751: response to salicylic acid	7.89E-06
14	GO:0019725: cellular homeostasis	7.99E-06
15	GO:0006468: protein phosphorylation	2.01E-05
16	GO:0031348: negative regulation of defense response	2.16E-05
17	GO:0042742: defense response to bacterium	3.77E-05
18	GO:0009737: response to abscisic acid	5.10E-05
19	GO:0007034: vacuolar transport	1.41E-04
20	GO:0009266: response to temperature stimulus	1.41E-04
21	GO:0034052: positive regulation of plant-type hypersensitive response	1.63E-04
22	GO:0010225: response to UV-C	1.63E-04
23	GO:0045927: positive regulation of growth	1.63E-04
24	GO:0009626: plant-type hypersensitive response	1.97E-04
25	GO:0009759: indole glucosinolate biosynthetic process	2.32E-04
26	GO:0035556: intracellular signal transduction	3.42E-04
27	GO:1900056: negative regulation of leaf senescence	4.03E-04
28	GO:0006562: proline catabolic process	4.23E-04
29	GO:0010482: regulation of epidermal cell division	4.23E-04
30	GO:1901183: positive regulation of camalexin biosynthetic process	4.23E-04
31	GO:0009270: response to humidity	4.23E-04
32	GO:0006643: membrane lipid metabolic process	4.23E-04
33	GO:0050691: regulation of defense response to virus by host	4.23E-04
34	GO:0019478: D-amino acid catabolic process	4.23E-04
35	GO:0051938: L-glutamate import	4.23E-04
36	GO:0015969: guanosine tetraphosphate metabolic process	4.23E-04
37	GO:0009609: response to symbiotic bacterium	4.23E-04
38	GO:0010421: hydrogen peroxide-mediated programmed cell death	4.23E-04
39	GO:0006979: response to oxidative stress	5.61E-04
40	GO:0046777: protein autophosphorylation	6.06E-04
41	GO:0010150: leaf senescence	6.90E-04
42	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	8.68E-04
43	GO:0000719: photoreactive repair	9.16E-04
44	GO:0044419: interspecies interaction between organisms	9.16E-04
45	GO:0031349: positive regulation of defense response	9.16E-04
46	GO:0034243: regulation of transcription elongation from RNA polymerase II promoter	9.16E-04
47	GO:0043091: L-arginine import	9.16E-04
48	GO:0006597: spermine biosynthetic process	9.16E-04
49	GO:0015914: phospholipid transport	9.16E-04
50	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	9.16E-04
51	GO:0010133: proline catabolic process to glutamate	9.16E-04
52	GO:0009838: abscission	9.16E-04
53	GO:0015802: basic amino acid transport	9.16E-04
54	GO:0010618: aerenchyma formation	9.16E-04
55	GO:0009611: response to wounding	1.11E-03
56	GO:0001666: response to hypoxia	1.18E-03
57	GO:0009816: defense response to bacterium, incompatible interaction	1.27E-03
58	GO:0008361: regulation of cell size	1.33E-03
59	GO:0018105: peptidyl-serine phosphorylation	1.44E-03
60	GO:0009653: anatomical structure morphogenesis	1.49E-03
61	GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process	1.49E-03
62	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	1.49E-03
63	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	1.49E-03
64	GO:0009062: fatty acid catabolic process	1.49E-03
65	GO:1900140: regulation of seedling development	1.49E-03
66	GO:0045793: positive regulation of cell size	1.49E-03
67	GO:0010186: positive regulation of cellular defense response	1.49E-03
68	GO:0032786: positive regulation of DNA-templated transcription, elongation	1.49E-03
69	GO:0002237: response to molecule of bacterial origin	1.70E-03
70	GO:0072583: clathrin-dependent endocytosis	2.15E-03
71	GO:0015696: ammonium transport	2.15E-03
72	GO:0002679: respiratory burst involved in defense response	2.15E-03
73	GO:0051289: protein homotetramerization	2.15E-03
74	GO:0034219: carbohydrate transmembrane transport	2.15E-03
75	GO:0070301: cellular response to hydrogen peroxide	2.15E-03
76	GO:0043207: response to external biotic stimulus	2.15E-03
77	GO:0072334: UDP-galactose transmembrane transport	2.15E-03
78	GO:0015749: monosaccharide transport	2.15E-03
79	GO:0006537: glutamate biosynthetic process	2.15E-03
80	GO:0051567: histone H3-K9 methylation	2.89E-03
81	GO:0010508: positive regulation of autophagy	2.89E-03
82	GO:0010188: response to microbial phytotoxin	2.89E-03
83	GO:0080142: regulation of salicylic acid biosynthetic process	2.89E-03
84	GO:0046345: abscisic acid catabolic process	2.89E-03
85	GO:0010483: pollen tube reception	2.89E-03
86	GO:0009652: thigmotropism	2.89E-03
87	GO:1902584: positive regulation of response to water deprivation	2.89E-03
88	GO:0072488: ammonium transmembrane transport	2.89E-03
89	GO:1901002: positive regulation of response to salt stress	2.89E-03
90	GO:0045892: negative regulation of transcription, DNA-templated	3.06E-03
91	GO:0071456: cellular response to hypoxia	3.13E-03
92	GO:0006886: intracellular protein transport	3.15E-03
93	GO:0009738: abscisic acid-activated signaling pathway	3.36E-03
94	GO:0009625: response to insect	3.42E-03
95	GO:0009306: protein secretion	3.71E-03
96	GO:0006470: protein dephosphorylation	3.91E-03
97	GO:0006952: defense response	3.94E-03
98	GO:1900425: negative regulation of defense response to bacterium	4.59E-03
99	GO:0006596: polyamine biosynthetic process	4.59E-03
100	GO:0006574: valine catabolic process	4.59E-03
101	GO:0010942: positive regulation of cell death	4.59E-03
102	GO:0006662: glycerol ether metabolic process	4.69E-03
103	GO:0046323: glucose import	4.69E-03
104	GO:0009414: response to water deprivation	4.71E-03
105	GO:0009753: response to jasmonic acid	4.87E-03
106	GO:0042372: phylloquinone biosynthetic process	5.53E-03
107	GO:0045926: negative regulation of growth	5.53E-03
108	GO:0009612: response to mechanical stimulus	5.53E-03
109	GO:0034389: lipid particle organization	5.53E-03
110	GO:0031930: mitochondria-nucleus signaling pathway	5.53E-03
111	GO:0010555: response to mannitol	5.53E-03
112	GO:0010310: regulation of hydrogen peroxide metabolic process	5.53E-03
113	GO:2000067: regulation of root morphogenesis	5.53E-03
114	GO:0009620: response to fungus	6.33E-03
115	GO:0050829: defense response to Gram-negative bacterium	6.54E-03
116	GO:0010044: response to aluminum ion	6.54E-03
117	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	6.54E-03
118	GO:0009610: response to symbiotic fungus	6.54E-03
119	GO:0046470: phosphatidylcholine metabolic process	6.54E-03
120	GO:0043090: amino acid import	6.54E-03
121	GO:0080186: developmental vegetative growth	6.54E-03
122	GO:0006904: vesicle docking involved in exocytosis	7.48E-03
123	GO:0009787: regulation of abscisic acid-activated signaling pathway	7.60E-03
124	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	7.60E-03
125	GO:1900150: regulation of defense response to fungus	7.60E-03
126	GO:0006605: protein targeting	7.60E-03
127	GO:0035265: organ growth	7.60E-03
128	GO:0051607: defense response to virus	7.94E-03
129	GO:0007186: G-protein coupled receptor signaling pathway	8.73E-03
130	GO:0010120: camalexin biosynthetic process	8.73E-03
131	GO:0030968: endoplasmic reticulum unfolded protein response	8.73E-03
132	GO:2000031: regulation of salicylic acid mediated signaling pathway	8.73E-03
133	GO:0010099: regulation of photomorphogenesis	8.73E-03
134	GO:0016192: vesicle-mediated transport	9.31E-03
135	GO:0010112: regulation of systemic acquired resistance	9.92E-03
136	GO:0009835: fruit ripening	9.92E-03
137	GO:0046685: response to arsenic-containing substance	9.92E-03
138	GO:0006098: pentose-phosphate shunt	9.92E-03
139	GO:0009821: alkaloid biosynthetic process	9.92E-03
140	GO:0051865: protein autoubiquitination	9.92E-03
141	GO:1900426: positive regulation of defense response to bacterium	1.12E-02
142	GO:0009651: response to salt stress	1.21E-02
143	GO:0006325: chromatin organization	1.24E-02
144	GO:0006032: chitin catabolic process	1.24E-02
145	GO:0007568: aging	1.27E-02
146	GO:0009682: induced systemic resistance	1.38E-02
147	GO:0052544: defense response by callose deposition in cell wall	1.38E-02
148	GO:0009750: response to fructose	1.38E-02
149	GO:0048765: root hair cell differentiation	1.38E-02
150	GO:0019684: photosynthesis, light reaction	1.38E-02
151	GO:0034599: cellular response to oxidative stress	1.46E-02
152	GO:0015706: nitrate transport	1.52E-02
153	GO:0002213: defense response to insect	1.52E-02
154	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.52E-02
155	GO:0012501: programmed cell death	1.52E-02
156	GO:0055046: microgametogenesis	1.66E-02
157	GO:2000012: regulation of auxin polar transport	1.66E-02
158	GO:0007166: cell surface receptor signaling pathway	1.70E-02
159	GO:0009744: response to sucrose	1.81E-02
160	GO:0051707: response to other organism	1.81E-02
161	GO:0000209: protein polyubiquitination	1.88E-02
162	GO:0010167: response to nitrate	1.96E-02
163	GO:0046688: response to copper ion	1.96E-02
164	GO:0070588: calcium ion transmembrane transport	1.96E-02
165	GO:0046854: phosphatidylinositol phosphorylation	1.96E-02
166	GO:0010053: root epidermal cell differentiation	1.96E-02
167	GO:0007030: Golgi organization	1.96E-02
168	GO:0009636: response to toxic substance	2.03E-02
169	GO:0000162: tryptophan biosynthetic process	2.12E-02
170	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.19E-02
171	GO:0031347: regulation of defense response	2.19E-02
172	GO:0015031: protein transport	2.25E-02
173	GO:0042538: hyperosmotic salinity response	2.27E-02
174	GO:0080147: root hair cell development	2.29E-02
175	GO:0030150: protein import into mitochondrial matrix	2.29E-02
176	GO:0005992: trehalose biosynthetic process	2.29E-02
177	GO:0009116: nucleoside metabolic process	2.29E-02
178	GO:0009809: lignin biosynthetic process	2.44E-02
179	GO:0010026: trichome differentiation	2.45E-02
180	GO:0006825: copper ion transport	2.45E-02
181	GO:0051302: regulation of cell division	2.45E-02
182	GO:0048278: vesicle docking	2.62E-02
183	GO:0003333: amino acid transmembrane transport	2.62E-02
184	GO:0016998: cell wall macromolecule catabolic process	2.62E-02
185	GO:0010431: seed maturation	2.62E-02
186	GO:0019915: lipid storage	2.62E-02
187	GO:2000022: regulation of jasmonic acid mediated signaling pathway	2.80E-02
188	GO:0035428: hexose transmembrane transport	2.80E-02
189	GO:0009693: ethylene biosynthetic process	2.98E-02
190	GO:0009723: response to ethylene	2.98E-02
191	GO:0009411: response to UV	2.98E-02
192	GO:0006012: galactose metabolic process	2.98E-02
193	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	3.34E-02
194	GO:0010118: stomatal movement	3.54E-02
195	GO:0009742: brassinosteroid mediated signaling pathway	3.68E-02
196	GO:0009741: response to brassinosteroid	3.73E-02
197	GO:0061025: membrane fusion	3.93E-02
198	GO:0009646: response to absence of light	3.93E-02
199	GO:0009749: response to glucose	4.13E-02
200	GO:0008654: phospholipid biosynthetic process	4.13E-02
201	GO:0071554: cell wall organization or biogenesis	4.33E-02
202	GO:0006635: fatty acid beta-oxidation	4.33E-02
203	GO:0016032: viral process	4.54E-02
204	GO:0007264: small GTPase mediated signal transduction	4.54E-02
205	GO:0009058: biosynthetic process	4.56E-02
206	GO:0050832: defense response to fungus	4.79E-02
207	GO:0019760: glucosinolate metabolic process	4.96E-02
208	GO:0007275: multicellular organism development	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
2	GO:0051499: D-aminoacyl-tRNA deacylase activity	0.00E+00
3	GO:0004168: dolichol kinase activity	0.00E+00
4	GO:0004610: phosphoacetylglucosamine mutase activity	0.00E+00
5	GO:0008320: protein transmembrane transporter activity	1.25E-05
6	GO:0016301: kinase activity	3.30E-05
7	GO:0004672: protein kinase activity	4.14E-05
8	GO:0005509: calcium ion binding	1.22E-04
9	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.77E-04
10	GO:0004683: calmodulin-dependent protein kinase activity	1.95E-04
11	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	4.23E-04
12	GO:0050308: sugar-phosphatase activity	4.23E-04
13	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	4.23E-04
14	GO:0016768: spermine synthase activity	4.23E-04
15	GO:2001147: camalexin binding	4.23E-04
16	GO:0009679: hexose:proton symporter activity	4.23E-04
17	GO:0032050: clathrin heavy chain binding	4.23E-04
18	GO:0008809: carnitine racemase activity	4.23E-04
19	GO:2001227: quercitrin binding	4.23E-04
20	GO:0004425: indole-3-glycerol-phosphate synthase activity	4.23E-04
21	GO:0015085: calcium ion transmembrane transporter activity	4.23E-04
22	GO:0004657: proline dehydrogenase activity	4.23E-04
23	GO:0015036: disulfide oxidoreductase activity	9.16E-04
24	GO:0008728: GTP diphosphokinase activity	9.16E-04
25	GO:0004766: spermidine synthase activity	9.16E-04
26	GO:0043565: sequence-specific DNA binding	1.31E-03
27	GO:0031683: G-protein beta/gamma-subunit complex binding	1.49E-03
28	GO:0001664: G-protein coupled receptor binding	1.49E-03
29	GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity	1.49E-03
30	GO:0016531: copper chaperone activity	1.49E-03
31	GO:0015181: arginine transmembrane transporter activity	2.15E-03
32	GO:0016656: monodehydroascorbate reductase (NADH) activity	2.15E-03
33	GO:0004165: dodecenoyl-CoA delta-isomerase activity	2.15E-03
34	GO:0015189: L-lysine transmembrane transporter activity	2.15E-03
35	GO:0043424: protein histidine kinase binding	2.60E-03
36	GO:0033612: receptor serine/threonine kinase binding	2.86E-03
37	GO:0000993: RNA polymerase II core binding	2.89E-03
38	GO:0005313: L-glutamate transmembrane transporter activity	2.89E-03
39	GO:0004871: signal transducer activity	3.23E-03
40	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	3.71E-03
41	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	3.71E-03
42	GO:0010294: abscisic acid glucosyltransferase activity	3.71E-03
43	GO:0005459: UDP-galactose transmembrane transporter activity	3.71E-03
44	GO:0015145: monosaccharide transmembrane transporter activity	3.71E-03
45	GO:0047134: protein-disulfide reductase activity	4.03E-03
46	GO:0005524: ATP binding	4.16E-03
47	GO:0005515: protein binding	4.23E-03
48	GO:0008519: ammonium transmembrane transporter activity	4.59E-03
49	GO:0004605: phosphatidate cytidylyltransferase activity	4.59E-03
50	GO:0004791: thioredoxin-disulfide reductase activity	5.05E-03
51	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	5.53E-03
52	GO:0003978: UDP-glucose 4-epimerase activity	5.53E-03
53	GO:0004656: procollagen-proline 4-dioxygenase activity	5.53E-03
54	GO:0004674: protein serine/threonine kinase activity	6.31E-03
55	GO:0043295: glutathione binding	6.54E-03
56	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	6.61E-03
57	GO:0005544: calcium-dependent phospholipid binding	7.60E-03
58	GO:0004869: cysteine-type endopeptidase inhibitor activity	7.60E-03
59	GO:0004714: transmembrane receptor protein tyrosine kinase activity	7.60E-03
60	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	7.60E-03
61	GO:0005516: calmodulin binding	8.00E-03
62	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	8.73E-03
63	GO:0004430: 1-phosphatidylinositol 4-kinase activity	8.73E-03
64	GO:0004630: phospholipase D activity	8.73E-03
65	GO:0008375: acetylglucosaminyltransferase activity	9.40E-03
66	GO:0005525: GTP binding	9.52E-03
67	GO:0004806: triglyceride lipase activity	9.92E-03
68	GO:0071949: FAD binding	9.92E-03
69	GO:0015174: basic amino acid transmembrane transporter activity	1.12E-02
70	GO:0047617: acyl-CoA hydrolase activity	1.12E-02
71	GO:0016844: strictosidine synthase activity	1.12E-02
72	GO:0015112: nitrate transmembrane transporter activity	1.12E-02
73	GO:0004713: protein tyrosine kinase activity	1.24E-02
74	GO:0004805: trehalose-phosphatase activity	1.24E-02
75	GO:0030234: enzyme regulator activity	1.24E-02
76	GO:0004568: chitinase activity	1.24E-02
77	GO:0008171: O-methyltransferase activity	1.24E-02
78	GO:0004722: protein serine/threonine phosphatase activity	1.30E-02
79	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.31E-02
80	GO:0005543: phospholipid binding	1.38E-02
81	GO:0003746: translation elongation factor activity	1.40E-02
82	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.53E-02
83	GO:0005388: calcium-transporting ATPase activity	1.66E-02
84	GO:0051119: sugar transmembrane transporter activity	1.96E-02
85	GO:0031418: L-ascorbic acid binding	2.29E-02
86	GO:0004707: MAP kinase activity	2.62E-02
87	GO:0015171: amino acid transmembrane transporter activity	2.70E-02
88	GO:0008234: cysteine-type peptidase activity	2.70E-02
89	GO:0003727: single-stranded RNA binding	3.16E-02
90	GO:0016746: transferase activity, transferring acyl groups	3.57E-02
91	GO:0015035: protein disulfide oxidoreductase activity	3.57E-02
92	GO:0005355: glucose transmembrane transporter activity	3.93E-02
93	GO:0019901: protein kinase binding	4.13E-02
94	GO:0004197: cysteine-type endopeptidase activity	4.54E-02