Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G46080

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010324: membrane invagination0.00E+00
2GO:0071327: cellular response to trehalose stimulus0.00E+00
3GO:0010055: atrichoblast differentiation0.00E+00
4GO:0090480: purine nucleotide-sugar transmembrane transport0.00E+00
5GO:1902001: fatty acid transmembrane transport0.00E+00
6GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
7GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance0.00E+00
8GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
9GO:0009312: oligosaccharide biosynthetic process0.00E+00
10GO:1900367: positive regulation of defense response to insect0.00E+00
11GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
12GO:0006983: ER overload response0.00E+00
13GO:0032515: negative regulation of phosphoprotein phosphatase activity0.00E+00
14GO:0046865: terpenoid transport0.00E+00
15GO:0009751: response to salicylic acid8.25E-07
16GO:0071456: cellular response to hypoxia2.37E-06
17GO:0080151: positive regulation of salicylic acid mediated signaling pathway1.41E-05
18GO:0051707: response to other organism1.77E-05
19GO:0010112: regulation of systemic acquired resistance7.20E-05
20GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway9.43E-05
21GO:0045227: capsule polysaccharide biosynthetic process1.71E-04
22GO:0033358: UDP-L-arabinose biosynthetic process1.71E-04
23GO:0042742: defense response to bacterium2.04E-04
24GO:0002237: response to molecule of bacterial origin2.62E-04
25GO:0010150: leaf senescence3.45E-04
26GO:0009643: photosynthetic acclimation3.65E-04
27GO:0031930: mitochondria-nucleus signaling pathway4.87E-04
28GO:1990542: mitochondrial transmembrane transport5.68E-04
29GO:0032107: regulation of response to nutrient levels5.68E-04
30GO:0048508: embryonic meristem development5.68E-04
31GO:0015760: glucose-6-phosphate transport5.68E-04
32GO:0043547: positive regulation of GTPase activity5.68E-04
33GO:1990641: response to iron ion starvation5.68E-04
34GO:0019567: arabinose biosynthetic process5.68E-04
35GO:0099132: ATP hydrolysis coupled cation transmembrane transport5.68E-04
36GO:1901183: positive regulation of camalexin biosynthetic process5.68E-04
37GO:0033306: phytol metabolic process5.68E-04
38GO:0050691: regulation of defense response to virus by host5.68E-04
39GO:0032491: detection of molecule of fungal origin5.68E-04
40GO:0009968: negative regulation of signal transduction5.68E-04
41GO:0006012: galactose metabolic process6.65E-04
42GO:0009737: response to abscisic acid8.35E-04
43GO:0010208: pollen wall assembly9.43E-04
44GO:0010204: defense response signaling pathway, resistance gene-independent9.43E-04
45GO:0009749: response to glucose1.19E-03
46GO:0080183: response to photooxidative stress1.22E-03
47GO:0010155: regulation of proton transport1.22E-03
48GO:0010618: aerenchyma formation1.22E-03
49GO:0080181: lateral root branching1.22E-03
50GO:0006024: glycosaminoglycan biosynthetic process1.22E-03
51GO:0055088: lipid homeostasis1.22E-03
52GO:0010115: regulation of abscisic acid biosynthetic process1.22E-03
53GO:0006101: citrate metabolic process1.22E-03
54GO:0043066: negative regulation of apoptotic process1.22E-03
55GO:0015865: purine nucleotide transport1.22E-03
56GO:0015908: fatty acid transport1.22E-03
57GO:0002240: response to molecule of oomycetes origin1.22E-03
58GO:0010271: regulation of chlorophyll catabolic process1.22E-03
59GO:0044419: interspecies interaction between organisms1.22E-03
60GO:0019725: cellular homeostasis1.22E-03
61GO:0009945: radial axis specification1.22E-03
62GO:0015712: hexose phosphate transport1.22E-03
63GO:0015012: heparan sulfate proteoglycan biosynthetic process1.22E-03
64GO:0051258: protein polymerization1.22E-03
65GO:0071668: plant-type cell wall assembly1.22E-03
66GO:1900426: positive regulation of defense response to bacterium1.33E-03
67GO:0010200: response to chitin1.38E-03
68GO:0009414: response to water deprivation1.67E-03
69GO:0006904: vesicle docking involved in exocytosis1.79E-03
70GO:0045836: positive regulation of meiotic nuclear division2.01E-03
71GO:0006065: UDP-glucuronate biosynthetic process2.01E-03
72GO:0015783: GDP-fucose transport2.01E-03
73GO:0015692: lead ion transport2.01E-03
74GO:0052546: cell wall pectin metabolic process2.01E-03
75GO:0015714: phosphoenolpyruvate transport2.01E-03
76GO:0015695: organic cation transport2.01E-03
77GO:0080168: abscisic acid transport2.01E-03
78GO:1900055: regulation of leaf senescence2.01E-03
79GO:0006954: inflammatory response2.01E-03
80GO:0034051: negative regulation of plant-type hypersensitive response2.01E-03
81GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway2.01E-03
82GO:0035436: triose phosphate transmembrane transport2.01E-03
83GO:0080163: regulation of protein serine/threonine phosphatase activity2.01E-03
84GO:0009617: response to bacterium2.07E-03
85GO:0009408: response to heat2.81E-03
86GO:0010116: positive regulation of abscisic acid biosynthetic process2.92E-03
87GO:0046902: regulation of mitochondrial membrane permeability2.92E-03
88GO:0010731: protein glutathionylation2.92E-03
89GO:0015696: ammonium transport2.92E-03
90GO:0071323: cellular response to chitin2.92E-03
91GO:0051289: protein homotetramerization2.92E-03
92GO:0055070: copper ion homeostasis2.92E-03
93GO:0009225: nucleotide-sugar metabolic process2.97E-03
94GO:0009753: response to jasmonic acid3.23E-03
95GO:0015031: protein transport3.30E-03
96GO:0006952: defense response3.50E-03
97GO:2000377: regulation of reactive oxygen species metabolic process3.68E-03
98GO:0080147: root hair cell development3.68E-03
99GO:0009863: salicylic acid mediated signaling pathway3.68E-03
100GO:0010109: regulation of photosynthesis3.93E-03
101GO:0072488: ammonium transmembrane transport3.93E-03
102GO:0015713: phosphoglycerate transport3.93E-03
103GO:0080142: regulation of salicylic acid biosynthetic process3.93E-03
104GO:0009867: jasmonic acid mediated signaling pathway3.96E-03
105GO:0031348: negative regulation of defense response4.89E-03
106GO:0006887: exocytosis4.94E-03
107GO:0006097: glyoxylate cycle5.05E-03
108GO:0009229: thiamine diphosphate biosynthetic process5.05E-03
109GO:0018344: protein geranylgeranylation5.05E-03
110GO:0010225: response to UV-C5.05E-03
111GO:0009247: glycolipid biosynthetic process5.05E-03
112GO:0045927: positive regulation of growth5.05E-03
113GO:0034052: positive regulation of plant-type hypersensitive response5.05E-03
114GO:0009625: response to insect5.34E-03
115GO:0009306: protein secretion5.81E-03
116GO:0010942: positive regulation of cell death6.26E-03
117GO:0010256: endomembrane system organization6.26E-03
118GO:0033365: protein localization to organelle6.26E-03
119GO:0010337: regulation of salicylic acid metabolic process6.26E-03
120GO:0006574: valine catabolic process6.26E-03
121GO:0009228: thiamine biosynthetic process6.26E-03
122GO:0002238: response to molecule of fungal origin6.26E-03
123GO:0009759: indole glucosinolate biosynthetic process6.26E-03
124GO:0009636: response to toxic substance6.37E-03
125GO:0010310: regulation of hydrogen peroxide metabolic process7.56E-03
126GO:0071470: cellular response to osmotic stress7.56E-03
127GO:0042372: phylloquinone biosynthetic process7.56E-03
128GO:0045926: negative regulation of growth7.56E-03
129GO:0009942: longitudinal axis specification7.56E-03
130GO:0007166: cell surface receptor signaling pathway7.77E-03
131GO:0006470: protein dephosphorylation7.77E-03
132GO:0010044: response to aluminum ion8.96E-03
133GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway8.96E-03
134GO:0046470: phosphatidylcholine metabolic process8.96E-03
135GO:1900056: negative regulation of leaf senescence8.96E-03
136GO:1900057: positive regulation of leaf senescence8.96E-03
137GO:0000122: negative regulation of transcription from RNA polymerase II promoter8.96E-03
138GO:1902074: response to salt8.96E-03
139GO:0009611: response to wounding9.07E-03
140GO:0010193: response to ozone9.10E-03
141GO:0007264: small GTPase mediated signal transduction9.74E-03
142GO:0031540: regulation of anthocyanin biosynthetic process1.04E-02
143GO:0006102: isocitrate metabolic process1.04E-02
144GO:0010928: regulation of auxin mediated signaling pathway1.04E-02
145GO:0009787: regulation of abscisic acid-activated signaling pathway1.04E-02
146GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline1.04E-02
147GO:0009819: drought recovery1.04E-02
148GO:0009850: auxin metabolic process1.04E-02
149GO:0043068: positive regulation of programmed cell death1.04E-02
150GO:0019375: galactolipid biosynthetic process1.04E-02
151GO:0009626: plant-type hypersensitive response1.08E-02
152GO:2000031: regulation of salicylic acid mediated signaling pathway1.20E-02
153GO:0010120: camalexin biosynthetic process1.20E-02
154GO:0006997: nucleus organization1.20E-02
155GO:0009624: response to nematode1.26E-02
156GO:0006979: response to oxidative stress1.33E-02
157GO:0015780: nucleotide-sugar transport1.36E-02
158GO:0007338: single fertilization1.36E-02
159GO:0006098: pentose-phosphate shunt1.36E-02
160GO:0019432: triglyceride biosynthetic process1.36E-02
161GO:0055085: transmembrane transport1.38E-02
162GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.40E-02
163GO:0010029: regulation of seed germination1.40E-02
164GO:0009816: defense response to bacterium, incompatible interaction1.40E-02
165GO:0009627: systemic acquired resistance1.48E-02
166GO:0043067: regulation of programmed cell death1.54E-02
167GO:0009086: methionine biosynthetic process1.54E-02
168GO:0010380: regulation of chlorophyll biosynthetic process1.54E-02
169GO:0008202: steroid metabolic process1.54E-02
170GO:0043069: negative regulation of programmed cell death1.71E-02
171GO:0051555: flavonol biosynthetic process1.71E-02
172GO:0009870: defense response signaling pathway, resistance gene-dependent1.71E-02
173GO:0006032: chitin catabolic process1.71E-02
174GO:0009684: indoleacetic acid biosynthetic process1.90E-02
175GO:0000038: very long-chain fatty acid metabolic process1.90E-02
176GO:0019684: photosynthesis, light reaction1.90E-02
177GO:0009089: lysine biosynthetic process via diaminopimelate1.90E-02
178GO:0006499: N-terminal protein myristoylation1.91E-02
179GO:0009407: toxin catabolic process1.91E-02
180GO:0010119: regulation of stomatal movement2.01E-02
181GO:0000266: mitochondrial fission2.09E-02
182GO:0002213: defense response to insect2.09E-02
183GO:0010105: negative regulation of ethylene-activated signaling pathway2.09E-02
184GO:0045037: protein import into chloroplast stroma2.09E-02
185GO:0018107: peptidyl-threonine phosphorylation2.29E-02
186GO:0006829: zinc II ion transport2.29E-02
187GO:0010102: lateral root morphogenesis2.29E-02
188GO:2000028: regulation of photoperiodism, flowering2.29E-02
189GO:0009738: abscisic acid-activated signaling pathway2.40E-02
190GO:0009266: response to temperature stimulus2.50E-02
191GO:0034605: cellular response to heat2.50E-02
192GO:0006897: endocytosis2.62E-02
193GO:0007165: signal transduction2.65E-02
194GO:0050832: defense response to fungus2.71E-02
195GO:0046688: response to copper ion2.71E-02
196GO:0010167: response to nitrate2.71E-02
197GO:0070588: calcium ion transmembrane transport2.71E-02
198GO:0000162: tryptophan biosynthetic process2.93E-02
199GO:0034976: response to endoplasmic reticulum stress2.93E-02
200GO:0000027: ribosomal large subunit assembly3.15E-02
201GO:0006289: nucleotide-excision repair3.15E-02
202GO:0045333: cellular respiration3.15E-02
203GO:0006855: drug transmembrane transport3.31E-02
204GO:0006825: copper ion transport3.38E-02
205GO:0031347: regulation of defense response3.44E-02
206GO:0042538: hyperosmotic salinity response3.56E-02
207GO:0006812: cation transport3.56E-02
208GO:0006334: nucleosome assembly3.62E-02
209GO:0009269: response to desiccation3.62E-02
210GO:0051321: meiotic cell cycle3.62E-02
211GO:0016998: cell wall macromolecule catabolic process3.62E-02
212GO:0006486: protein glycosylation3.82E-02
213GO:0009814: defense response, incompatible interaction3.86E-02
214GO:0010017: red or far-red light signaling pathway3.86E-02
215GO:2000022: regulation of jasmonic acid mediated signaling pathway3.86E-02
216GO:0006468: protein phosphorylation3.89E-02
217GO:0010224: response to UV-B3.96E-02
218GO:0042127: regulation of cell proliferation4.36E-02
219GO:0009873: ethylene-activated signaling pathway4.40E-02
220GO:0000271: polysaccharide biosynthetic process4.88E-02
221GO:0042391: regulation of membrane potential4.88E-02
RankGO TermAdjusted P value
1GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
2GO:0055105: ubiquitin-protein transferase inhibitor activity0.00E+00
3GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
4GO:0050334: thiaminase activity0.00E+00
5GO:0004865: protein serine/threonine phosphatase inhibitor activity0.00E+00
6GO:0005212: structural constituent of eye lens0.00E+00
7GO:0003978: UDP-glucose 4-epimerase activity1.66E-05
8GO:0005509: calcium ion binding1.54E-04
9GO:0050373: UDP-arabinose 4-epimerase activity1.71E-04
10GO:0043565: sequence-specific DNA binding5.37E-04
11GO:0042626: ATPase activity, coupled to transmembrane movement of substances5.68E-04
12GO:2001227: quercitrin binding5.68E-04
13GO:0004662: CAAX-protein geranylgeranyltransferase activity5.68E-04
14GO:0047150: betaine-homocysteine S-methyltransferase activity5.68E-04
15GO:0019707: protein-cysteine S-acyltransferase activity5.68E-04
16GO:2001147: camalexin binding5.68E-04
17GO:0046481: digalactosyldiacylglycerol synthase activity5.68E-04
18GO:0015245: fatty acid transporter activity5.68E-04
19GO:0010285: L,L-diaminopimelate aminotransferase activity5.68E-04
20GO:0047364: desulfoglucosinolate sulfotransferase activity1.22E-03
21GO:0003994: aconitate hydratase activity1.22E-03
22GO:0015152: glucose-6-phosphate transmembrane transporter activity1.22E-03
23GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity1.22E-03
24GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity1.22E-03
25GO:0032934: sterol binding1.22E-03
26GO:0015036: disulfide oxidoreductase activity1.22E-03
27GO:0050736: O-malonyltransferase activity1.22E-03
28GO:0048531: beta-1,3-galactosyltransferase activity1.22E-03
29GO:0004568: chitinase activity1.55E-03
30GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity1.79E-03
31GO:0008559: xenobiotic-transporting ATPase activity1.80E-03
32GO:0016301: kinase activity1.86E-03
33GO:0071917: triose-phosphate transmembrane transporter activity2.01E-03
34GO:0005457: GDP-fucose transmembrane transporter activity2.01E-03
35GO:0003979: UDP-glucose 6-dehydrogenase activity2.01E-03
36GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity2.01E-03
37GO:0004324: ferredoxin-NADP+ reductase activity2.01E-03
38GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity2.01E-03
39GO:0016531: copper chaperone activity2.01E-03
40GO:0032403: protein complex binding2.01E-03
41GO:0008375: acetylglucosaminyltransferase activity2.39E-03
42GO:0030247: polysaccharide binding2.56E-03
43GO:0017077: oxidative phosphorylation uncoupler activity2.92E-03
44GO:0035529: NADH pyrophosphatase activity2.92E-03
45GO:0035250: UDP-galactosyltransferase activity2.92E-03
46GO:0010178: IAA-amino acid conjugate hydrolase activity2.92E-03
47GO:0001046: core promoter sequence-specific DNA binding3.68E-03
48GO:0015120: phosphoglycerate transmembrane transporter activity3.93E-03
49GO:0004834: tryptophan synthase activity3.93E-03
50GO:0009916: alternative oxidase activity3.93E-03
51GO:0004930: G-protein coupled receptor activity3.93E-03
52GO:0005471: ATP:ADP antiporter activity5.05E-03
53GO:0070696: transmembrane receptor protein serine/threonine kinase binding5.05E-03
54GO:0005496: steroid binding5.05E-03
55GO:0047631: ADP-ribose diphosphatase activity5.05E-03
56GO:0008519: ammonium transmembrane transporter activity6.26E-03
57GO:0000210: NAD+ diphosphatase activity6.26E-03
58GO:0051287: NAD binding7.00E-03
59GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity7.56E-03
60GO:0102391: decanoate--CoA ligase activity7.56E-03
61GO:0004144: diacylglycerol O-acyltransferase activity7.56E-03
62GO:0004656: procollagen-proline 4-dioxygenase activity7.56E-03
63GO:0004467: long-chain fatty acid-CoA ligase activity8.96E-03
64GO:0043295: glutathione binding8.96E-03
65GO:0004714: transmembrane receptor protein tyrosine kinase activity1.04E-02
66GO:0047893: flavonol 3-O-glucosyltransferase activity1.04E-02
67GO:0004033: aldo-keto reductase (NADP) activity1.04E-02
68GO:0004708: MAP kinase kinase activity1.04E-02
69GO:0008483: transaminase activity1.18E-02
70GO:0008142: oxysterol binding1.20E-02
71GO:0004630: phospholipase D activity1.20E-02
72GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity1.20E-02
73GO:0016740: transferase activity1.28E-02
74GO:0047617: acyl-CoA hydrolase activity1.54E-02
75GO:0004806: triglyceride lipase activity1.56E-02
76GO:0016758: transferase activity, transferring hexosyl groups1.63E-02
77GO:0015020: glucuronosyltransferase activity1.71E-02
78GO:0004864: protein phosphatase inhibitor activity1.71E-02
79GO:0004713: protein tyrosine kinase activity1.71E-02
80GO:0016757: transferase activity, transferring glycosyl groups1.76E-02
81GO:0005543: phospholipid binding1.90E-02
82GO:0005516: calmodulin binding1.91E-02
83GO:0005388: calcium-transporting ATPase activity2.29E-02
84GO:0004022: alcohol dehydrogenase (NAD) activity2.29E-02
85GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism2.29E-02
86GO:0005315: inorganic phosphate transmembrane transporter activity2.29E-02
87GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.31E-02
88GO:0015297: antiporter activity2.38E-02
89GO:0004722: protein serine/threonine phosphatase activity2.56E-02
90GO:0005524: ATP binding2.70E-02
91GO:0030552: cAMP binding2.71E-02
92GO:0030553: cGMP binding2.71E-02
93GO:0008061: chitin binding2.71E-02
94GO:0003712: transcription cofactor activity2.71E-02
95GO:0008146: sulfotransferase activity2.71E-02
96GO:0004364: glutathione transferase activity2.73E-02
97GO:0008194: UDP-glycosyltransferase activity2.91E-02
98GO:0031418: L-ascorbic acid binding3.15E-02
99GO:0003954: NADH dehydrogenase activity3.15E-02
100GO:0005216: ion channel activity3.38E-02
101GO:0008324: cation transmembrane transporter activity3.38E-02
102GO:0003700: transcription factor activity, sequence-specific DNA binding3.52E-02
103GO:0019706: protein-cysteine S-palmitoyltransferase activity3.62E-02
104GO:0035251: UDP-glucosyltransferase activity3.62E-02
105GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity3.86E-02
106GO:0008810: cellulase activity4.11E-02
107GO:0004499: N,N-dimethylaniline monooxygenase activity4.36E-02
108GO:0004674: protein serine/threonine kinase activity4.43E-02
109GO:0005507: copper ion binding4.55E-02
110GO:0005249: voltage-gated potassium channel activity4.88E-02
111GO:0030551: cyclic nucleotide binding4.88E-02
112GO:0005451: monovalent cation:proton antiporter activity4.88E-02
113GO:0080043: quercetin 3-O-glucosyltransferase activity4.95E-02
114GO:0080044: quercetin 7-O-glucosyltransferase activity4.95E-02
RankGO TermAdjusted P value
1GO:0016021: integral component of membrane2.07E-08
2GO:0005886: plasma membrane2.55E-05
3GO:0005794: Golgi apparatus2.66E-05
4GO:0000813: ESCRT I complex2.60E-04
5GO:0000164: protein phosphatase type 1 complex2.60E-04
6GO:0005953: CAAX-protein geranylgeranyltransferase complex5.68E-04
7GO:0000138: Golgi trans cisterna5.68E-04
8GO:0005901: caveola1.22E-03
9GO:0031304: intrinsic component of mitochondrial inner membrane1.22E-03
10GO:0031314: extrinsic component of mitochondrial inner membrane1.22E-03
11GO:0008287: protein serine/threonine phosphatase complex2.01E-03
12GO:0005743: mitochondrial inner membrane2.43E-03
13GO:0070062: extracellular exosome2.92E-03
14GO:0030658: transport vesicle membrane2.92E-03
15GO:0000325: plant-type vacuole3.52E-03
16GO:0005774: vacuolar membrane3.76E-03
17GO:0005802: trans-Golgi network7.94E-03
18GO:0000145: exocyst9.74E-03
19GO:0032580: Golgi cisterna membrane1.11E-02
20GO:0043231: intracellular membrane-bounded organelle1.12E-02
21GO:0005789: endoplasmic reticulum membrane1.32E-02
22GO:0030665: clathrin-coated vesicle membrane1.54E-02
23GO:0005740: mitochondrial envelope1.71E-02
24GO:0017119: Golgi transport complex1.71E-02
25GO:0000139: Golgi membrane2.46E-02
26GO:0031902: late endosome membrane2.62E-02
27GO:0005795: Golgi stack2.71E-02
28GO:0005768: endosome2.74E-02
29GO:0005769: early endosome2.93E-02
30GO:0009506: plasmodesma3.10E-02
31GO:0005758: mitochondrial intermembrane space3.15E-02
32GO:0005777: peroxisome3.19E-02
33GO:0070469: respiratory chain3.38E-02
34GO:0005741: mitochondrial outer membrane3.62E-02
35GO:0005635: nuclear envelope4.09E-02
36GO:0005887: integral component of plasma membrane4.72E-02
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Gene type



Gene DE type