Gene: AT3G29290
     

Gene description


TAIR ID: AT3G29290

Short description: Pentatricopeptide repeat (PPR) superfamily protein

Pathogen responsiveness: -1.34

General responsiveness: 1.01

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G107805  

Wheat: No orthologous gene

GO biological process


RNA modification, embryo development ending in seed dormancy


GO cellular component


mitochondrion, chloroplast


GO molecular function


RNA binding, endonuclease activity


Protein domain


PfamPF13041, PPR repeat family
PfamPF01535, PPR repeat

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G61850, AT4G36990

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


4 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.708.83E-03
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-1.675.34E-11
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-1.982.90E-04
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-1.535.53E-13






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