GO Enrichment Analysis of Co-expressed Genes with
AT3G29290
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 2 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 3 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 4 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
| 5 | GO:0015882: L-ascorbic acid transport | 0.00E+00 |
| 6 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
| 7 | GO:0010021: amylopectin biosynthetic process | 1.16E-06 |
| 8 | GO:0019252: starch biosynthetic process | 2.81E-06 |
| 9 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 3.09E-06 |
| 10 | GO:0015995: chlorophyll biosynthetic process | 8.06E-06 |
| 11 | GO:0009658: chloroplast organization | 1.41E-05 |
| 12 | GO:1902478: negative regulation of defense response to bacterium, incompatible interaction | 3.00E-05 |
| 13 | GO:0043489: RNA stabilization | 3.00E-05 |
| 14 | GO:0010028: xanthophyll cycle | 3.00E-05 |
| 15 | GO:0048363: mucilage pectin metabolic process | 3.00E-05 |
| 16 | GO:0018026: peptidyl-lysine monomethylation | 7.58E-05 |
| 17 | GO:0071668: plant-type cell wall assembly | 7.58E-05 |
| 18 | GO:0080183: response to photooxidative stress | 7.58E-05 |
| 19 | GO:0034051: negative regulation of plant-type hypersensitive response | 1.32E-04 |
| 20 | GO:0005977: glycogen metabolic process | 1.32E-04 |
| 21 | GO:0000913: preprophase band assembly | 1.32E-04 |
| 22 | GO:0031022: nuclear migration along microfilament | 1.32E-04 |
| 23 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 1.97E-04 |
| 24 | GO:0009904: chloroplast accumulation movement | 3.42E-04 |
| 25 | GO:0015979: photosynthesis | 3.91E-04 |
| 26 | GO:0006796: phosphate-containing compound metabolic process | 4.20E-04 |
| 27 | GO:0010190: cytochrome b6f complex assembly | 4.20E-04 |
| 28 | GO:0009903: chloroplast avoidance movement | 5.02E-04 |
| 29 | GO:1901259: chloroplast rRNA processing | 5.02E-04 |
| 30 | GO:0048564: photosystem I assembly | 6.76E-04 |
| 31 | GO:0032544: plastid translation | 7.68E-04 |
| 32 | GO:0098656: anion transmembrane transport | 8.63E-04 |
| 33 | GO:0005982: starch metabolic process | 9.61E-04 |
| 34 | GO:0006779: porphyrin-containing compound biosynthetic process | 9.61E-04 |
| 35 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 9.61E-04 |
| 36 | GO:0031425: chloroplast RNA processing | 9.61E-04 |
| 37 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.06E-03 |
| 38 | GO:0009773: photosynthetic electron transport in photosystem I | 1.16E-03 |
| 39 | GO:0005983: starch catabolic process | 1.27E-03 |
| 40 | GO:0006633: fatty acid biosynthetic process | 1.47E-03 |
| 41 | GO:0010207: photosystem II assembly | 1.50E-03 |
| 42 | GO:0009266: response to temperature stimulus | 1.50E-03 |
| 43 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.73E-03 |
| 44 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.98E-03 |
| 45 | GO:0008299: isoprenoid biosynthetic process | 1.98E-03 |
| 46 | GO:0016114: terpenoid biosynthetic process | 2.11E-03 |
| 47 | GO:0000271: polysaccharide biosynthetic process | 2.80E-03 |
| 48 | GO:0009741: response to brassinosteroid | 2.94E-03 |
| 49 | GO:0045489: pectin biosynthetic process | 2.94E-03 |
| 50 | GO:0007018: microtubule-based movement | 3.09E-03 |
| 51 | GO:0009791: post-embryonic development | 3.24E-03 |
| 52 | GO:0000302: response to reactive oxygen species | 3.40E-03 |
| 53 | GO:0016032: viral process | 3.55E-03 |
| 54 | GO:0010286: heat acclimation | 4.03E-03 |
| 55 | GO:0000910: cytokinesis | 4.20E-03 |
| 56 | GO:0010027: thylakoid membrane organization | 4.36E-03 |
| 57 | GO:0006397: mRNA processing | 4.66E-03 |
| 58 | GO:0009817: defense response to fungus, incompatible interaction | 5.23E-03 |
| 59 | GO:0009631: cold acclimation | 5.78E-03 |
| 60 | GO:0045087: innate immune response | 6.16E-03 |
| 61 | GO:0016051: carbohydrate biosynthetic process | 6.16E-03 |
| 62 | GO:0034599: cellular response to oxidative stress | 6.35E-03 |
| 63 | GO:0042538: hyperosmotic salinity response | 8.60E-03 |
| 64 | GO:0006396: RNA processing | 1.18E-02 |
| 65 | GO:0009845: seed germination | 1.43E-02 |
| 66 | GO:0042744: hydrogen peroxide catabolic process | 1.49E-02 |
| 67 | GO:0009790: embryo development | 1.51E-02 |
| 68 | GO:0042742: defense response to bacterium | 1.61E-02 |
| 69 | GO:0009451: RNA modification | 1.73E-02 |
| 70 | GO:0010228: vegetative to reproductive phase transition of meristem | 1.76E-02 |
| 71 | GO:0005975: carbohydrate metabolic process | 2.44E-02 |
| 72 | GO:0055114: oxidation-reduction process | 2.50E-02 |
| 73 | GO:0046686: response to cadmium ion | 2.51E-02 |
| 74 | GO:0044550: secondary metabolite biosynthetic process | 2.88E-02 |
| 75 | GO:0006629: lipid metabolic process | 3.58E-02 |
| 76 | GO:0008152: metabolic process | 3.83E-02 |
| 77 | GO:0006508: proteolysis | 4.92E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015229: L-ascorbic acid transporter activity | 0.00E+00 |
| 2 | GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity | 0.00E+00 |
| 3 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
| 4 | GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity | 0.00E+00 |
| 5 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 6 | GO:0033201: alpha-1,4-glucan synthase activity | 6.26E-08 |
| 7 | GO:0004373: glycogen (starch) synthase activity | 2.43E-07 |
| 8 | GO:0009011: starch synthase activity | 1.16E-06 |
| 9 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 3.00E-05 |
| 10 | GO:0016630: protochlorophyllide reductase activity | 7.58E-05 |
| 11 | GO:0019156: isoamylase activity | 7.58E-05 |
| 12 | GO:0042389: omega-3 fatty acid desaturase activity | 7.58E-05 |
| 13 | GO:0004751: ribose-5-phosphate isomerase activity | 1.32E-04 |
| 14 | GO:0070402: NADPH binding | 1.32E-04 |
| 15 | GO:0043023: ribosomal large subunit binding | 1.97E-04 |
| 16 | GO:0016279: protein-lysine N-methyltransferase activity | 2.67E-04 |
| 17 | GO:0003959: NADPH dehydrogenase activity | 3.42E-04 |
| 18 | GO:0004556: alpha-amylase activity | 4.20E-04 |
| 19 | GO:0016462: pyrophosphatase activity | 4.20E-04 |
| 20 | GO:0004130: cytochrome-c peroxidase activity | 4.20E-04 |
| 21 | GO:0004427: inorganic diphosphatase activity | 5.88E-04 |
| 22 | GO:0004033: aldo-keto reductase (NADP) activity | 6.76E-04 |
| 23 | GO:0008135: translation factor activity, RNA binding | 7.68E-04 |
| 24 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 7.68E-04 |
| 25 | GO:0005315: inorganic phosphate transmembrane transporter activity | 1.38E-03 |
| 26 | GO:0008266: poly(U) RNA binding | 1.50E-03 |
| 27 | GO:0031409: pigment binding | 1.73E-03 |
| 28 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 2.25E-03 |
| 29 | GO:0004601: peroxidase activity | 2.46E-03 |
| 30 | GO:0008514: organic anion transmembrane transporter activity | 2.52E-03 |
| 31 | GO:0016853: isomerase activity | 3.09E-03 |
| 32 | GO:0016168: chlorophyll binding | 4.53E-03 |
| 33 | GO:0004222: metalloendopeptidase activity | 5.60E-03 |
| 34 | GO:0030145: manganese ion binding | 5.78E-03 |
| 35 | GO:0003746: translation elongation factor activity | 6.16E-03 |
| 36 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 8.17E-03 |
| 37 | GO:0003777: microtubule motor activity | 9.70E-03 |
| 38 | GO:0016757: transferase activity, transferring glycosyl groups | 1.25E-02 |
| 39 | GO:0005525: GTP binding | 1.30E-02 |
| 40 | GO:0016758: transferase activity, transferring hexosyl groups | 1.33E-02 |
| 41 | GO:0004252: serine-type endopeptidase activity | 1.46E-02 |
| 42 | GO:0015144: carbohydrate transmembrane transporter activity | 1.54E-02 |
| 43 | GO:0005506: iron ion binding | 1.58E-02 |
| 44 | GO:0005351: sugar:proton symporter activity | 1.68E-02 |
| 45 | GO:0008017: microtubule binding | 1.76E-02 |
| 46 | GO:0003824: catalytic activity | 1.77E-02 |
| 47 | GO:0000287: magnesium ion binding | 2.29E-02 |
| 48 | GO:0003729: mRNA binding | 2.40E-02 |
| 49 | GO:0020037: heme binding | 2.54E-02 |
| 50 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 3.25E-02 |
| 51 | GO:0003924: GTPase activity | 3.58E-02 |
| 52 | GO:0016887: ATPase activity | 4.88E-02 |