Gene: AT3G25890
     

Gene description


TAIR ID: AT3G25890

Short description: Integrase-type DNA-binding superfamily protein

Pathogen responsiveness: -0.25

General responsiveness: -0.60

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, transcription, methionine biosynthetic process, ethylene-activated signaling pathway, methylation


GO cellular component


nucleus, cytoplasm


GO molecular function


transcription factor activity, sequence-specific DNA binding, zinc ion binding, betaine-homocysteine S-methyltransferase activity, DNA binding


Protein domain


PfamPF00847, AP2 domain
SMARTSM00380, AP2

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G56110, AT4G36990

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


17 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Penta, controlPenta, PstDC3000 12 h2.044.69E-06
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h2.403.02E-12
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h2.294.88E-12
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h2.112.71E-11
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.013.72E-11
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.967.13E-03
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h1.914.01E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.848.37E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h2.401.54E-14
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h2.172.58E-03
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h1.684.55E-03
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h2.351.69E-15
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h1.885.64E-10
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h2.033.29E-11
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h2.522.57E-16
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h2.101.85E-12
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h1.571.65E-03






Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.