GO Enrichment Analysis of Co-expressed Genes with
AT3G25890
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010401: pectic galactan metabolic process | 0.00E+00 |
| 2 | GO:0002143: tRNA wobble position uridine thiolation | 2.76E-05 |
| 3 | GO:0016337: single organismal cell-cell adhesion | 2.76E-05 |
| 4 | GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic | 2.76E-05 |
| 5 | GO:0006643: membrane lipid metabolic process | 2.76E-05 |
| 6 | GO:0019483: beta-alanine biosynthetic process | 7.01E-05 |
| 7 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 7.01E-05 |
| 8 | GO:0015012: heparan sulfate proteoglycan biosynthetic process | 7.01E-05 |
| 9 | GO:0006024: glycosaminoglycan biosynthetic process | 7.01E-05 |
| 10 | GO:0052541: plant-type cell wall cellulose metabolic process | 7.01E-05 |
| 11 | GO:0006212: uracil catabolic process | 7.01E-05 |
| 12 | GO:0042780: tRNA 3'-end processing | 1.23E-04 |
| 13 | GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic | 1.23E-04 |
| 14 | GO:0002679: respiratory burst involved in defense response | 1.83E-04 |
| 15 | GO:0060548: negative regulation of cell death | 2.48E-04 |
| 16 | GO:0008219: cell death | 2.84E-04 |
| 17 | GO:0006090: pyruvate metabolic process | 3.18E-04 |
| 18 | GO:0006665: sphingolipid metabolic process | 3.18E-04 |
| 19 | GO:0006777: Mo-molybdopterin cofactor biosynthetic process | 3.92E-04 |
| 20 | GO:0010044: response to aluminum ion | 5.49E-04 |
| 21 | GO:0046470: phosphatidylcholine metabolic process | 5.49E-04 |
| 22 | GO:0043562: cellular response to nitrogen levels | 7.18E-04 |
| 23 | GO:0051865: protein autoubiquitination | 8.07E-04 |
| 24 | GO:0009051: pentose-phosphate shunt, oxidative branch | 8.07E-04 |
| 25 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 9.92E-04 |
| 26 | GO:0006995: cellular response to nitrogen starvation | 9.92E-04 |
| 27 | GO:0000266: mitochondrial fission | 1.19E-03 |
| 28 | GO:0006108: malate metabolic process | 1.29E-03 |
| 29 | GO:0006807: nitrogen compound metabolic process | 1.29E-03 |
| 30 | GO:0080188: RNA-directed DNA methylation | 1.50E-03 |
| 31 | GO:0006468: protein phosphorylation | 1.90E-03 |
| 32 | GO:0051260: protein homooligomerization | 1.97E-03 |
| 33 | GO:0031348: negative regulation of defense response | 2.09E-03 |
| 34 | GO:0000413: protein peptidyl-prolyl isomerization | 2.61E-03 |
| 35 | GO:0010087: phloem or xylem histogenesis | 2.61E-03 |
| 36 | GO:0046777: protein autophosphorylation | 2.93E-03 |
| 37 | GO:0002229: defense response to oomycetes | 3.16E-03 |
| 38 | GO:0009816: defense response to bacterium, incompatible interaction | 4.22E-03 |
| 39 | GO:0016049: cell growth | 4.70E-03 |
| 40 | GO:0006099: tricarboxylic acid cycle | 5.91E-03 |
| 41 | GO:0009738: abscisic acid-activated signaling pathway | 6.89E-03 |
| 42 | GO:0031347: regulation of defense response | 7.79E-03 |
| 43 | GO:0006486: protein glycosylation | 8.40E-03 |
| 44 | GO:0006457: protein folding | 9.22E-03 |
| 45 | GO:0016569: covalent chromatin modification | 1.03E-02 |
| 46 | GO:0042545: cell wall modification | 1.05E-02 |
| 47 | GO:0018105: peptidyl-serine phosphorylation | 1.10E-02 |
| 48 | GO:0009742: brassinosteroid mediated signaling pathway | 1.12E-02 |
| 49 | GO:0042742: defense response to bacterium | 1.45E-02 |
| 50 | GO:0045490: pectin catabolic process | 1.58E-02 |
| 51 | GO:0007166: cell surface receptor signaling pathway | 1.74E-02 |
| 52 | GO:0009617: response to bacterium | 1.79E-02 |
| 53 | GO:0046686: response to cadmium ion | 2.26E-02 |
| 54 | GO:0007049: cell cycle | 2.33E-02 |
| 55 | GO:0010200: response to chitin | 2.58E-02 |
| 56 | GO:0016192: vesicle-mediated transport | 2.61E-02 |
| 57 | GO:0009737: response to abscisic acid | 3.09E-02 |
| 58 | GO:0016042: lipid catabolic process | 3.25E-02 |
| 59 | GO:0009751: response to salicylic acid | 3.29E-02 |
| 60 | GO:0050832: defense response to fungus | 4.29E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015370: solute:sodium symporter activity | 0.00E+00 |
| 2 | GO:0061604: molybdopterin-synthase sulfurtransferase activity | 0.00E+00 |
| 3 | GO:0003837: beta-ureidopropionase activity | 0.00E+00 |
| 4 | GO:0061605: molybdopterin-synthase adenylyltransferase activity | 0.00E+00 |
| 5 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 2.76E-05 |
| 6 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 3.08E-05 |
| 7 | GO:0033612: receptor serine/threonine kinase binding | 6.61E-05 |
| 8 | GO:0016891: endoribonuclease activity, producing 5'-phosphomonoesters | 7.01E-05 |
| 9 | GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity | 1.23E-04 |
| 10 | GO:0008265: Mo-molybdopterin cofactor sulfurase activity | 1.23E-04 |
| 11 | GO:0042781: 3'-tRNA processing endoribonuclease activity | 1.23E-04 |
| 12 | GO:0004792: thiosulfate sulfurtransferase activity | 1.83E-04 |
| 13 | GO:0005524: ATP binding | 2.38E-04 |
| 14 | GO:0004470: malic enzyme activity | 2.48E-04 |
| 15 | GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor | 2.48E-04 |
| 16 | GO:0015204: urea transmembrane transporter activity | 2.48E-04 |
| 17 | GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity | 2.48E-04 |
| 18 | GO:0008641: small protein activating enzyme activity | 3.18E-04 |
| 19 | GO:0008948: oxaloacetate decarboxylase activity | 3.18E-04 |
| 20 | GO:0005546: phosphatidylinositol-4,5-bisphosphate binding | 3.18E-04 |
| 21 | GO:0004012: phospholipid-translocating ATPase activity | 4.69E-04 |
| 22 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 6.32E-04 |
| 23 | GO:0004630: phospholipase D activity | 7.18E-04 |
| 24 | GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity | 7.18E-04 |
| 25 | GO:0035251: UDP-glucosyltransferase activity | 1.97E-03 |
| 26 | GO:0016301: kinase activity | 2.04E-03 |
| 27 | GO:0000287: magnesium ion binding | 2.18E-03 |
| 28 | GO:0016791: phosphatase activity | 3.60E-03 |
| 29 | GO:0004674: protein serine/threonine kinase activity | 3.98E-03 |
| 30 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 4.38E-03 |
| 31 | GO:0004721: phosphoprotein phosphatase activity | 4.54E-03 |
| 32 | GO:0004683: calmodulin-dependent protein kinase activity | 4.54E-03 |
| 33 | GO:0030145: manganese ion binding | 5.38E-03 |
| 34 | GO:0015293: symporter activity | 7.40E-03 |
| 35 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 7.59E-03 |
| 36 | GO:0051287: NAD binding | 7.79E-03 |
| 37 | GO:0045330: aspartyl esterase activity | 9.01E-03 |
| 38 | GO:0030599: pectinesterase activity | 1.03E-02 |
| 39 | GO:0016746: transferase activity, transferring acyl groups | 1.10E-02 |
| 40 | GO:0004386: helicase activity | 1.14E-02 |
| 41 | GO:0005509: calcium ion binding | 1.33E-02 |
| 42 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 1.51E-02 |
| 43 | GO:0046910: pectinesterase inhibitor activity | 1.51E-02 |
| 44 | GO:0008017: microtubule binding | 1.63E-02 |
| 45 | GO:0004672: protein kinase activity | 2.13E-02 |
| 46 | GO:0046982: protein heterodimerization activity | 2.13E-02 |
| 47 | GO:0046872: metal ion binding | 2.81E-02 |
| 48 | GO:0004722: protein serine/threonine phosphatase activity | 3.05E-02 |
| 49 | GO:0005515: protein binding | 3.19E-02 |
| 50 | GO:0003924: GTPase activity | 3.32E-02 |
| 51 | GO:0016887: ATPase activity | 4.53E-02 |
| 52 | GO:0000166: nucleotide binding | 4.99E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005886: plasma membrane | 1.29E-05 |
| 2 | GO:0045252: oxoglutarate dehydrogenase complex | 2.76E-05 |
| 3 | GO:0009506: plasmodesma | 3.13E-04 |
| 4 | GO:0043234: protein complex | 1.62E-03 |
| 5 | GO:0005774: vacuolar membrane | 2.33E-03 |
| 6 | GO:0071944: cell periphery | 3.45E-03 |
| 7 | GO:0005737: cytoplasm | 8.09E-03 |
| 8 | GO:0010008: endosome membrane | 9.65E-03 |
| 9 | GO:0005768: endosome | 1.30E-02 |
| 10 | GO:0009524: phragmoplast | 1.31E-02 |
| 11 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.30E-02 |
| 12 | GO:0005829: cytosol | 2.34E-02 |
| 13 | GO:0005874: microtubule | 2.45E-02 |
| 14 | GO:0005794: Golgi apparatus | 2.78E-02 |
| 15 | GO:0005887: integral component of plasma membrane | 4.13E-02 |