Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G21630

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0033587: shikimate biosynthetic process0.00E+00
2GO:0071327: cellular response to trehalose stimulus0.00E+00
3GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
4GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
5GO:1900367: positive regulation of defense response to insect0.00E+00
6GO:0006990: positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response0.00E+00
7GO:0002764: immune response-regulating signaling pathway0.00E+00
8GO:0006468: protein phosphorylation5.33E-07
9GO:0010200: response to chitin2.15E-05
10GO:0031348: negative regulation of defense response2.42E-05
11GO:0006470: protein dephosphorylation2.88E-05
12GO:0042742: defense response to bacterium4.75E-05
13GO:0009751: response to salicylic acid6.48E-05
14GO:0080142: regulation of salicylic acid biosynthetic process1.12E-04
15GO:0060548: negative regulation of cell death1.12E-04
16GO:0045227: capsule polysaccharide biosynthetic process1.12E-04
17GO:0033358: UDP-L-arabinose biosynthetic process1.12E-04
18GO:0006952: defense response1.40E-04
19GO:0010150: leaf senescence1.44E-04
20GO:0002237: response to molecule of bacterial origin1.53E-04
21GO:0009697: salicylic acid biosynthetic process1.73E-04
22GO:0009620: response to fungus2.34E-04
23GO:0002238: response to molecule of fungal origin2.46E-04
24GO:2000022: regulation of jasmonic acid mediated signaling pathway3.61E-04
25GO:0009611: response to wounding3.64E-04
26GO:0009867: jasmonic acid mediated signaling pathway3.75E-04
27GO:0030974: thiamine pyrophosphate transport4.40E-04
28GO:1901183: positive regulation of camalexin biosynthetic process4.40E-04
29GO:0019673: GDP-mannose metabolic process4.40E-04
30GO:0032491: detection of molecule of fungal origin4.40E-04
31GO:0042759: long-chain fatty acid biosynthetic process4.40E-04
32GO:0010365: positive regulation of ethylene biosynthetic process4.40E-04
33GO:0051938: L-glutamate import4.40E-04
34GO:0051245: negative regulation of cellular defense response4.40E-04
35GO:0019567: arabinose biosynthetic process4.40E-04
36GO:0015969: guanosine tetraphosphate metabolic process4.40E-04
37GO:0099132: ATP hydrolysis coupled cation transmembrane transport4.40E-04
38GO:0010941: regulation of cell death4.40E-04
39GO:0051180: vitamin transport4.40E-04
40GO:0009787: regulation of abscisic acid-activated signaling pathway5.32E-04
41GO:0010204: defense response signaling pathway, resistance gene-independent6.48E-04
42GO:2000031: regulation of salicylic acid mediated signaling pathway6.48E-04
43GO:0046777: protein autophosphorylation6.79E-04
44GO:0006486: protein glycosylation8.83E-04
45GO:1900426: positive regulation of defense response to bacterium9.15E-04
46GO:0002240: response to molecule of oomycetes origin9.50E-04
47GO:0043066: negative regulation of apoptotic process9.50E-04
48GO:0015865: purine nucleotide transport9.50E-04
49GO:0031349: positive regulation of defense response9.50E-04
50GO:0010271: regulation of chlorophyll catabolic process9.50E-04
51GO:0015893: drug transport9.50E-04
52GO:0010541: acropetal auxin transport9.50E-04
53GO:0019725: cellular homeostasis9.50E-04
54GO:0043091: L-arginine import9.50E-04
55GO:0046939: nucleotide phosphorylation9.50E-04
56GO:0080151: positive regulation of salicylic acid mediated signaling pathway9.50E-04
57GO:0015802: basic amino acid transport9.50E-04
58GO:0080185: effector dependent induction by symbiont of host immune response9.50E-04
59GO:0010618: aerenchyma formation9.50E-04
60GO:1902066: regulation of cell wall pectin metabolic process9.50E-04
61GO:0010115: regulation of abscisic acid biosynthetic process9.50E-04
62GO:0009617: response to bacterium1.04E-03
63GO:0006904: vesicle docking involved in exocytosis1.10E-03
64GO:0009626: plant-type hypersensitive response1.25E-03
65GO:0009816: defense response to bacterium, incompatible interaction1.36E-03
66GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.55E-03
67GO:0034051: negative regulation of plant-type hypersensitive response1.55E-03
68GO:0016045: detection of bacterium1.55E-03
69GO:1900140: regulation of seedling development1.55E-03
70GO:0010359: regulation of anion channel activity1.55E-03
71GO:1901672: positive regulation of systemic acquired resistance1.55E-03
72GO:0042351: 'de novo' GDP-L-fucose biosynthetic process1.55E-03
73GO:0051176: positive regulation of sulfur metabolic process1.55E-03
74GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process1.55E-03
75GO:0048586: regulation of long-day photoperiodism, flowering1.55E-03
76GO:0032922: circadian regulation of gene expression1.55E-03
77GO:0006954: inflammatory response1.55E-03
78GO:0010498: proteasomal protein catabolic process1.55E-03
79GO:2000028: regulation of photoperiodism, flowering1.59E-03
80GO:0055046: microgametogenesis1.59E-03
81GO:0007165: signal transduction1.61E-03
82GO:0009737: response to abscisic acid1.72E-03
83GO:0034605: cellular response to heat1.80E-03
84GO:0070588: calcium ion transmembrane transport2.02E-03
85GO:0009225: nucleotide-sugar metabolic process2.02E-03
86GO:0010167: response to nitrate2.02E-03
87GO:0072583: clathrin-dependent endocytosis2.24E-03
88GO:0010731: protein glutathionylation2.24E-03
89GO:0006986: response to unfolded protein2.24E-03
90GO:0046513: ceramide biosynthetic process2.24E-03
91GO:0046836: glycolipid transport2.24E-03
92GO:0000187: activation of MAPK activity2.24E-03
93GO:0048194: Golgi vesicle budding2.24E-03
94GO:0046902: regulation of mitochondrial membrane permeability2.24E-03
95GO:0010306: rhamnogalacturonan II biosynthetic process2.24E-03
96GO:0010104: regulation of ethylene-activated signaling pathway2.24E-03
97GO:0006612: protein targeting to membrane2.24E-03
98GO:0009399: nitrogen fixation2.24E-03
99GO:0009863: salicylic acid mediated signaling pathway2.49E-03
100GO:0006887: exocytosis3.00E-03
101GO:0010508: positive regulation of autophagy3.01E-03
102GO:0006542: glutamine biosynthetic process3.01E-03
103GO:0010483: pollen tube reception3.01E-03
104GO:0010363: regulation of plant-type hypersensitive response3.01E-03
105GO:0010107: potassium ion import3.01E-03
106GO:0071456: cellular response to hypoxia3.31E-03
107GO:0010017: red or far-red light signaling pathway3.31E-03
108GO:0016226: iron-sulfur cluster assembly3.31E-03
109GO:0051707: response to other organism3.33E-03
110GO:0009625: response to insect3.61E-03
111GO:0006012: galactose metabolic process3.61E-03
112GO:0018344: protein geranylgeranylation3.85E-03
113GO:0010225: response to UV-C3.85E-03
114GO:0009409: response to cold3.95E-03
115GO:0006855: drug transmembrane transport4.05E-03
116GO:0050832: defense response to fungus4.29E-03
117GO:0042391: regulation of membrane potential4.60E-03
118GO:0009408: response to heat4.76E-03
119GO:1900425: negative regulation of defense response to bacterium4.77E-03
120GO:0010337: regulation of salicylic acid metabolic process4.77E-03
121GO:0018258: protein O-linked glycosylation via hydroxyproline4.77E-03
122GO:0010942: positive regulation of cell death4.77E-03
123GO:0010405: arabinogalactan protein metabolic process4.77E-03
124GO:0009749: response to glucose5.73E-03
125GO:0009094: L-phenylalanine biosynthetic process5.75E-03
126GO:0009423: chorismate biosynthetic process5.75E-03
127GO:0031930: mitochondria-nucleus signaling pathway5.75E-03
128GO:0010555: response to mannitol5.75E-03
129GO:2000037: regulation of stomatal complex patterning5.75E-03
130GO:0010310: regulation of hydrogen peroxide metabolic process5.75E-03
131GO:2000067: regulation of root morphogenesis5.75E-03
132GO:0071470: cellular response to osmotic stress5.75E-03
133GO:0045926: negative regulation of growth5.75E-03
134GO:0010193: response to ozone6.14E-03
135GO:0010161: red light signaling pathway6.80E-03
136GO:0071446: cellular response to salicylic acid stimulus6.80E-03
137GO:1900056: negative regulation of leaf senescence6.80E-03
138GO:0070370: cellular heat acclimation6.80E-03
139GO:0006970: response to osmotic stress7.59E-03
140GO:0030162: regulation of proteolysis7.91E-03
141GO:0006491: N-glycan processing7.91E-03
142GO:0045010: actin nucleation7.91E-03
143GO:0009061: anaerobic respiration7.91E-03
144GO:0010928: regulation of auxin mediated signaling pathway7.91E-03
145GO:0030968: endoplasmic reticulum unfolded protein response9.09E-03
146GO:0010099: regulation of photomorphogenesis9.09E-03
147GO:0009932: cell tip growth9.09E-03
148GO:0007186: G-protein coupled receptor signaling pathway9.09E-03
149GO:0009788: negative regulation of abscisic acid-activated signaling pathway9.42E-03
150GO:0009627: systemic acquired resistance9.96E-03
151GO:0042128: nitrate assimilation9.96E-03
152GO:0090333: regulation of stomatal closure1.03E-02
153GO:0046916: cellular transition metal ion homeostasis1.03E-02
154GO:0010112: regulation of systemic acquired resistance1.03E-02
155GO:0009051: pentose-phosphate shunt, oxidative branch1.03E-02
156GO:0006098: pentose-phosphate shunt1.03E-02
157GO:0016567: protein ubiquitination1.10E-02
158GO:0010380: regulation of chlorophyll biosynthetic process1.16E-02
159GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.16E-02
160GO:0048354: mucilage biosynthetic process involved in seed coat development1.16E-02
161GO:0009817: defense response to fungus, incompatible interaction1.17E-02
162GO:0006032: chitin catabolic process1.30E-02
163GO:0043069: negative regulation of programmed cell death1.30E-02
164GO:0048527: lateral root development1.35E-02
165GO:0010119: regulation of stomatal movement1.35E-02
166GO:0035556: intracellular signal transduction1.42E-02
167GO:0009073: aromatic amino acid family biosynthetic process1.44E-02
168GO:0009750: response to fructose1.44E-02
169GO:0009414: response to water deprivation1.52E-02
170GO:0010105: negative regulation of ethylene-activated signaling pathway1.58E-02
171GO:0008361: regulation of cell size1.58E-02
172GO:0015706: nitrate transport1.58E-02
173GO:0002213: defense response to insect1.58E-02
174GO:0009785: blue light signaling pathway1.73E-02
175GO:0006626: protein targeting to mitochondrion1.73E-02
176GO:0006006: glucose metabolic process1.73E-02
177GO:0010229: inflorescence development1.73E-02
178GO:0007034: vacuolar transport1.89E-02
179GO:0009266: response to temperature stimulus1.89E-02
180GO:0009744: response to sucrose1.91E-02
181GO:0046854: phosphatidylinositol phosphorylation2.05E-02
182GO:0034976: response to endoplasmic reticulum stress2.21E-02
183GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process2.32E-02
184GO:0006487: protein N-linked glycosylation2.38E-02
185GO:0009873: ethylene-activated signaling pathway2.48E-02
186GO:0009695: jasmonic acid biosynthetic process2.55E-02
187GO:0003333: amino acid transmembrane transport2.73E-02
188GO:0016998: cell wall macromolecule catabolic process2.73E-02
189GO:0048278: vesicle docking2.73E-02
190GO:0009909: regulation of flower development2.86E-02
191GO:0009814: defense response, incompatible interaction2.91E-02
192GO:0010227: floral organ abscission3.10E-02
193GO:0019722: calcium-mediated signaling3.29E-02
194GO:0009561: megagametogenesis3.29E-02
195GO:0009306: protein secretion3.29E-02
196GO:0009624: response to nematode3.67E-02
197GO:0010118: stomatal movement3.68E-02
198GO:0042631: cellular response to water deprivation3.68E-02
199GO:0009738: abscisic acid-activated signaling pathway3.76E-02
200GO:0006885: regulation of pH3.88E-02
201GO:0048544: recognition of pollen4.09E-02
202GO:0061025: membrane fusion4.09E-02
203GO:0009646: response to absence of light4.09E-02
204GO:0008654: phospholipid biosynthetic process4.30E-02
205GO:0002229: defense response to oomycetes4.51E-02
206GO:0000302: response to reactive oxygen species4.51E-02
207GO:0016032: viral process4.73E-02
208GO:0030163: protein catabolic process4.94E-02
RankGO TermAdjusted P value
1GO:0004107: chorismate synthase activity0.00E+00
2GO:0005212: structural constituent of eye lens0.00E+00
3GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
4GO:0004168: dolichol kinase activity0.00E+00
5GO:0005522: profilin binding0.00E+00
6GO:0070696: transmembrane receptor protein serine/threonine kinase binding1.51E-08
7GO:0016301: kinase activity3.02E-08
8GO:0004674: protein serine/threonine kinase activity3.15E-07
9GO:0005524: ATP binding4.63E-07
10GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism4.81E-06
11GO:0004012: phospholipid-translocating ATPase activity8.65E-06
12GO:0050373: UDP-arabinose 4-epimerase activity1.12E-04
13GO:0004722: protein serine/threonine phosphatase activity2.50E-04
14GO:0003978: UDP-glucose 4-epimerase activity3.30E-04
15GO:0032050: clathrin heavy chain binding4.40E-04
16GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity4.40E-04
17GO:1901149: salicylic acid binding4.40E-04
18GO:0090422: thiamine pyrophosphate transporter activity4.40E-04
19GO:0004662: CAAX-protein geranylgeranyltransferase activity4.40E-04
20GO:0015085: calcium ion transmembrane transporter activity4.40E-04
21GO:0008446: GDP-mannose 4,6-dehydratase activity4.40E-04
22GO:0005515: protein binding4.47E-04
23GO:0019901: protein kinase binding7.33E-04
24GO:0008728: GTP diphosphokinase activity9.50E-04
25GO:0048531: beta-1,3-galactosyltransferase activity9.50E-04
26GO:0050291: sphingosine N-acyltransferase activity9.50E-04
27GO:0004568: chitinase activity1.06E-03
28GO:0004713: protein tyrosine kinase activity1.06E-03
29GO:0004842: ubiquitin-protein transferase activity1.48E-03
30GO:0031683: G-protein beta/gamma-subunit complex binding1.55E-03
31GO:0046423: allene-oxide cyclase activity1.55E-03
32GO:0001664: G-protein coupled receptor binding1.55E-03
33GO:0005509: calcium ion binding1.58E-03
34GO:0005388: calcium-transporting ATPase activity1.59E-03
35GO:0015238: drug transmembrane transporter activity1.89E-03
36GO:0004190: aspartic-type endopeptidase activity2.02E-03
37GO:0030552: cAMP binding2.02E-03
38GO:0030553: cGMP binding2.02E-03
39GO:0015181: arginine transmembrane transporter activity2.24E-03
40GO:0015189: L-lysine transmembrane transporter activity2.24E-03
41GO:0017089: glycolipid transporter activity2.24E-03
42GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity2.24E-03
43GO:0019201: nucleotide kinase activity2.24E-03
44GO:0043424: protein histidine kinase binding2.75E-03
45GO:0005216: ion channel activity2.75E-03
46GO:0019199: transmembrane receptor protein kinase activity3.01E-03
47GO:0047769: arogenate dehydratase activity3.01E-03
48GO:0004345: glucose-6-phosphate dehydrogenase activity3.01E-03
49GO:0004664: prephenate dehydratase activity3.01E-03
50GO:0051861: glycolipid binding3.01E-03
51GO:0005313: L-glutamate transmembrane transporter activity3.01E-03
52GO:0033612: receptor serine/threonine kinase binding3.03E-03
53GO:0005525: GTP binding3.58E-03
54GO:0004040: amidase activity3.85E-03
55GO:0005471: ATP:ADP antiporter activity3.85E-03
56GO:0004356: glutamate-ammonia ligase activity3.85E-03
57GO:0045431: flavonol synthase activity3.85E-03
58GO:0005249: voltage-gated potassium channel activity4.60E-03
59GO:0030551: cyclic nucleotide binding4.60E-03
60GO:0035252: UDP-xylosyltransferase activity4.77E-03
61GO:0004605: phosphatidate cytidylyltransferase activity4.77E-03
62GO:1990714: hydroxyproline O-galactosyltransferase activity4.77E-03
63GO:0004672: protein kinase activity4.78E-03
64GO:0031625: ubiquitin protein ligase binding5.55E-03
65GO:0004723: calcium-dependent protein serine/threonine phosphatase activity5.75E-03
66GO:0019900: kinase binding5.75E-03
67GO:0004559: alpha-mannosidase activity5.75E-03
68GO:0004017: adenylate kinase activity5.75E-03
69GO:0000287: magnesium ion binding6.58E-03
70GO:0043531: ADP binding7.80E-03
71GO:0004708: MAP kinase kinase activity7.91E-03
72GO:0004714: transmembrane receptor protein tyrosine kinase activity7.91E-03
73GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity7.92E-03
74GO:0005516: calmodulin binding8.94E-03
75GO:0004430: 1-phosphatidylinositol 4-kinase activity9.09E-03
76GO:0008271: secondary active sulfate transmembrane transporter activity9.09E-03
77GO:0071949: FAD binding1.03E-02
78GO:0004721: phosphoprotein phosphatase activity1.05E-02
79GO:0004806: triglyceride lipase activity1.05E-02
80GO:0015112: nitrate transmembrane transporter activity1.16E-02
81GO:0015174: basic amino acid transmembrane transporter activity1.16E-02
82GO:0008047: enzyme activator activity1.30E-02
83GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.41E-02
84GO:0008559: xenobiotic-transporting ATPase activity1.44E-02
85GO:0005543: phospholipid binding1.44E-02
86GO:0015297: antiporter activity1.45E-02
87GO:0015116: sulfate transmembrane transporter activity1.58E-02
88GO:0008378: galactosyltransferase activity1.58E-02
89GO:0046872: metal ion binding1.60E-02
90GO:0003924: GTPase activity1.69E-02
91GO:0031072: heat shock protein binding1.73E-02
92GO:0005215: transporter activity1.92E-02
93GO:0003954: NADH dehydrogenase activity2.38E-02
94GO:0016298: lipase activity2.67E-02
95GO:0019706: protein-cysteine S-palmitoyltransferase activity2.73E-02
96GO:0036459: thiol-dependent ubiquitinyl hydrolase activity2.73E-02
97GO:0004707: MAP kinase activity2.73E-02
98GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups3.15E-02
99GO:0005451: monovalent cation:proton antiporter activity3.68E-02
100GO:0010181: FMN binding4.09E-02
101GO:0015299: solute:proton antiporter activity4.09E-02
102GO:0004843: thiol-dependent ubiquitin-specific protease activity4.51E-02
103GO:0015385: sodium:proton antiporter activity4.94E-02
104GO:0051015: actin filament binding4.94E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane5.68E-12
2GO:0016021: integral component of membrane6.00E-05
3GO:0005911: cell-cell junction4.40E-04
4GO:0005953: CAAX-protein geranylgeranyltransferase complex4.40E-04
5GO:0031304: intrinsic component of mitochondrial inner membrane9.50E-04
6GO:0005901: caveola9.50E-04
7GO:0008287: protein serine/threonine phosphatase complex1.55E-03
8GO:0030139: endocytic vesicle1.55E-03
9GO:0000145: exocyst6.56E-03
10GO:0032580: Golgi cisterna membrane7.45E-03
11GO:0005887: integral component of plasma membrane8.13E-03
12GO:0005794: Golgi apparatus1.23E-02
13GO:0005740: mitochondrial envelope1.30E-02
14GO:0030125: clathrin vesicle coat1.30E-02
15GO:0048471: perinuclear region of cytoplasm1.44E-02
16GO:0090404: pollen tube tip1.44E-02
17GO:0031902: late endosome membrane1.76E-02
18GO:0090406: pollen tube1.91E-02
19GO:0030176: integral component of endoplasmic reticulum membrane2.05E-02
20GO:0005737: cytoplasm2.31E-02
21GO:0005758: mitochondrial intermembrane space2.38E-02
22GO:0005635: nuclear envelope2.77E-02
23GO:0005834: heterotrimeric G-protein complex3.25E-02
24GO:0012505: endomembrane system3.56E-02
25GO:0005768: endosome3.57E-02
26GO:0005770: late endosome3.88E-02
27GO:0009504: cell plate4.30E-02
28GO:0005654: nucleoplasm4.46E-02
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Gene type



Gene DE type