Gene: AT3G21090
     

Gene description


TAIR ID: AT3G21090

Short description: ABC-2 type transporter family protein

Pathogen responsiveness: -1.62

General responsiveness: -1.67

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


response to karrikin


GO cellular component


plasma membrane, integral component of membrane


GO molecular function


ATPase activity, coupled to transmembrane movement of substances, ATP binding


Protein domain


PfamPF00005, ABC transporter
PfamPF01061, ABC-2 type transporter
SMARTSM00382, AAA

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G24260, AT2G20180

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 26 (Top10%)

click to view PPI network

Coexpression network

GSE13739_EDS16_GO  view

Differentially expressed condition


6 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.601.27E-02
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.923.02E-11
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.056.32E-09
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.822.05E-11
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h2.895.26E-11
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h1.623.28E-07






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