Gene: AT3G21090

Gene description

TAIR ID: AT3G21090

Short description: ABC-2 type transporter family protein

Pathogen responsiveness: -1.62

General responsiveness: -1.67


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process

response to karrikin

GO cellular component

plasma membrane, integral component of membrane

GO molecular function

ATPase activity, coupled to transmembrane movement of substances, ATP binding

Protein domain

PfamPF00005, ABC transporter
PfamPF01061, ABC-2 type transporter

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

AT1G24260, AT2G20180


Protein-protein interaction network

The number of partners (degree) is: 26 (Top10%)

click to view PPI network

Coexpression network

GSE13739_EDS16_GO  view

Differentially expressed condition

6 conditions

SeriesControlTreatmentLog2FCAdj. P value
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.601.27E-02
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.923.02E-11
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.056.32E-09
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.822.05E-11
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h2.895.26E-11
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h1.623.28E-07

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