Gene: AT3G16950
Gene description
TAIR ID: AT3G16950
Short description: lipoamide dehydrogenase 1
Pathogen responsiveness: -0.68
General responsiveness: -1.05
GO biological process
oxidation-reduction process, acetyl-CoA biosynthetic process from pyruvate, response to arsenic-containing substance, cell redox homeostasis
GO cellular component
chloroplast stroma, chloroplast envelope, chloroplast, nucleolus, mitochondrion
GO molecular function
dihydrolipoyl dehydrogenase activity, flavin adenine dinucleotide binding
Protein domain
| Pfam | PF02852, Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain |
| Pfam | PF07992, Pyridine nucleotide-disulphide oxidoreductase |
Metabolic pathway
PWY-5173: superpathway of acetyl-CoA biosynthesis
PYRUVDEHYD-PWY: pyruvate decarboxylation to acetyl CoA
GLYCLEAV-PWY: glycine cleavage
PWY-5084: 2-oxoglutarate decarboxylation to succinyl-CoA
PWY-5046: 2-oxoisovalerate decarboxylation to isobutanoyl-CoA
PWY-5464: superpathway of cytosolic glycolysis (plants), pyruvate dehydrogenase and TCA cycle
KEGG pathway
PATH:ath01200: Carbon metabolism
PATH:ath00010: Glycolysis / Gluconeogenesis
PATH:ath00020: Citrate cycle (TCA cycle)
PATH:ath00620: Pyruvate metabolism
PATH:ath00630: Glyoxylate and dicarboxylate metabolism
PATH:ath00640: Propanoate metabolism
PATH:ath00260: Glycine, serine and threonine metabolism
PATH:ath00280: Valine, leucine and isoleucine degradation
click to view PPI networkCoexpression network
Differentially expressed condition 
12 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE17500 | Col, WT, control 0 h | Col, WT, PstDC3000 24 h | -1.68 | 5.76E-05 |
| GSE17500 | Col, miR393, control 0 h | Col, miR393, PstDC3000 24 h | -1.75 | 6.29E-05 |
| GSE18978 | Col, WT, control 24 h | Col, WT, PsmES4326 24 h | -2.10 | 2.16E-04 |
| GSE26679 | Col, edr1, GC 0 h | Col, edr1, GC 36 h | 1.50 | 2.01E-10 |
| GSE37269 | Ei2, WT, control | Ei2, WT, TEV 21 d | -2.02 | 2.93E-03 |
| GSE37269 | St0, WT, control | St0, WT, TEV 21 d | -1.50 | 1.62E-02 |
| GSE40544 | Col, WT, control | Col, WT, PstDC3000 AvrRpt2 | -1.70 | 5.95E-06 |
| GSE5520 | Col, WT, control 10 h | Col, WT, Cor- 10 h | -2.60 | 1.62E-05 |
| GSE5520 | Col, WT, control 10 h | Col, WT, Cor- hrpS- 10 h | -1.62 | 2.01E-02 |
| GSE6556 | Col, gh3.5, control | Col, gh3.5, PstDC3000 AvrRpt2 48 h | -1.79 | 6.91E-05 |
| GSE9674 | Ws-4, AtMYB30 ox, control | Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h | -1.68 | 2.87E-02 |
| GSE9674 | Ws-4, AtMYB30 ox, control | Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h | -2.25 | 1.21E-02 |
Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.