gene detail

Gene description

TAIR ID: AT3G13640

Short description: RNAse l inhibitor protein 1

Pathogen responsiveness: -2.61

General responsiveness: -2.28

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

translational initiation, translational termination, ribosomal subunit export from nucleus, transport

GO cellular component

membrane, eukaryotic translation initiation factor 3 complex

GO molecular function

transporter activity, ATP binding, ATPase activity, iron ion binding, ribosomal small subunit binding, 4 iron, 4 sulfur cluster binding

Protein domain

Pfam	PF00037, 4Fe-4S binding domain
Pfam	PF00005, ABC transporter
Pfam	PF04068, Possible Fer4-like domain in RNase L inhibitor, RLI
SMART	SM00382, AAA

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G16857, AT4G16110, AT1G24260

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2 view

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-3.01	1.86E-05
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_24 h	-1.80	3.05E-02
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_24 h	-1.66	4.22E-02