gene detail

Gene description

TAIR ID: AT3G08950

Short description: electron transport SCO1/SenC family protein

Pathogen responsiveness: -1.43

General responsiveness: -1.39

Orthologous

Rice: No orthologous gene

Maize:

GRMZM5G812923

Wheat: No orthologous gene

GO biological process

embryo development ending in seed dormancy, mitochondrial respiratory chain complex IV assembly, copper ion transport, respiratory chain complex IV assembly, cellular copper ion homeostasis, cell redox homeostasis, embryo development

GO cellular component

mitochondrial inner membrane, integral component of membrane, mitochondrion

GO molecular function

unkown

Protein domain

Pfam	PF02630, SCO1/SenC

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G14230, AT5G41315

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

2 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	1.68	2.13E-11
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	2.03	5.61E-03