co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G08950

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010401: pectic galactan metabolic process	0.00E+00
2	GO:0006983: ER overload response	0.00E+00
3	GO:0000303: response to superoxide	3.25E-05
4	GO:0006562: proline catabolic process	3.25E-05
5	GO:0032469: endoplasmic reticulum calcium ion homeostasis	3.25E-05
6	GO:0034975: protein folding in endoplasmic reticulum	3.25E-05
7	GO:0016337: single organismal cell-cell adhesion	3.25E-05
8	GO:0043066: negative regulation of apoptotic process	8.18E-05
9	GO:0008535: respiratory chain complex IV assembly	8.18E-05
10	GO:0015012: heparan sulfate proteoglycan biosynthetic process	8.18E-05
11	GO:0010155: regulation of proton transport	8.18E-05
12	GO:0010133: proline catabolic process to glutamate	8.18E-05
13	GO:0006024: glycosaminoglycan biosynthetic process	8.18E-05
14	GO:0052541: plant-type cell wall cellulose metabolic process	8.18E-05
15	GO:0031022: nuclear migration along microfilament	1.42E-04
16	GO:1902626: assembly of large subunit precursor of preribosome	1.42E-04
17	GO:0042256: mature ribosome assembly	1.42E-04
18	GO:0006809: nitric oxide biosynthetic process	2.11E-04
19	GO:0006537: glutamate biosynthetic process	2.11E-04
20	GO:0048194: Golgi vesicle budding	2.11E-04
21	GO:0000460: maturation of 5.8S rRNA	2.85E-04
22	GO:0009902: chloroplast relocation	2.85E-04
23	GO:0006665: sphingolipid metabolic process	3.65E-04
24	GO:0045962: positive regulation of development, heterochronic	4.48E-04
25	GO:0001731: formation of translation preinitiation complex	4.48E-04
26	GO:0000470: maturation of LSU-rRNA	4.48E-04
27	GO:0000054: ribosomal subunit export from nucleus	5.36E-04
28	GO:0006367: transcription initiation from RNA polymerase II promoter	8.20E-04
29	GO:0009873: ethylene-activated signaling pathway	8.44E-04
30	GO:0009086: methionine biosynthetic process	1.02E-03
31	GO:0006396: RNA processing	1.08E-03
32	GO:0043069: negative regulation of programmed cell death	1.13E-03
33	GO:0000038: very long-chain fatty acid metabolic process	1.24E-03
34	GO:0012501: programmed cell death	1.36E-03
35	GO:0045037: protein import into chloroplast stroma	1.36E-03
36	GO:0010102: lateral root morphogenesis	1.47E-03
37	GO:0006446: regulation of translational initiation	1.60E-03
38	GO:0006413: translational initiation	1.66E-03
39	GO:0030150: protein import into mitochondrial matrix	1.99E-03
40	GO:2000377: regulation of reactive oxygen species metabolic process	1.99E-03
41	GO:0071215: cellular response to abscisic acid stimulus	2.55E-03
42	GO:0009414: response to water deprivation	2.93E-03
43	GO:0006970: response to osmotic stress	2.93E-03
44	GO:0010087: phloem or xylem histogenesis	3.00E-03
45	GO:0010193: response to ozone	3.63E-03
46	GO:0016032: viral process	3.80E-03
47	GO:0045454: cell redox homeostasis	4.01E-03
48	GO:0006464: cellular protein modification process	4.14E-03
49	GO:0009816: defense response to bacterium, incompatible interaction	4.85E-03
50	GO:0009408: response to heat	4.94E-03
51	GO:0008219: cell death	5.60E-03
52	GO:0009867: jasmonic acid mediated signaling pathway	6.60E-03
53	GO:0009637: response to blue light	6.60E-03
54	GO:0009738: abscisic acid-activated signaling pathway	8.47E-03
55	GO:0009965: leaf morphogenesis	8.53E-03
56	GO:0031347: regulation of defense response	8.99E-03
57	GO:0006486: protein glycosylation	9.69E-03
58	GO:0048367: shoot system development	1.11E-02
59	GO:0006457: protein folding	1.13E-02
60	GO:0042545: cell wall modification	1.22E-02
61	GO:0009790: embryo development	1.62E-02
62	GO:0045490: pectin catabolic process	1.83E-02
63	GO:0006470: protein dephosphorylation	2.01E-02
64	GO:0009617: response to bacterium	2.07E-02
65	GO:0009723: response to ethylene	2.77E-02
66	GO:0048366: leaf development	2.80E-02
67	GO:0016192: vesicle-mediated transport	3.02E-02
68	GO:0044550: secondary metabolite biosynthetic process	3.09E-02
69	GO:0006351: transcription, DNA-templated	3.19E-02
70	GO:0032259: methylation	3.72E-02
71	GO:0048364: root development	3.96E-02

Rank	GO Term	Adjusted P value
1	GO:0050220: prostaglandin-E synthase activity	0.00E+00
2	GO:0005548: phospholipid transporter activity	0.00E+00
3	GO:0004657: proline dehydrogenase activity	3.25E-05
4	GO:0047150: betaine-homocysteine S-methyltransferase activity	3.25E-05
5	GO:0003743: translation initiation factor activity	1.94E-04
6	GO:0043023: ribosomal large subunit binding	2.11E-04
7	GO:0003950: NAD+ ADP-ribosyltransferase activity	5.36E-04
8	GO:0004012: phospholipid-translocating ATPase activity	5.36E-04
9	GO:0043022: ribosome binding	7.22E-04
10	GO:0004525: ribonuclease III activity	7.22E-04
11	GO:0015035: protein disulfide oxidoreductase activity	1.08E-03
12	GO:0015266: protein channel activity	1.47E-03
13	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.47E-03
14	GO:0031072: heat shock protein binding	1.47E-03
15	GO:0005262: calcium channel activity	1.47E-03
16	GO:0035251: UDP-glucosyltransferase activity	2.26E-03
17	GO:0003756: protein disulfide isomerase activity	2.69E-03
18	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.97E-03
19	GO:0004004: ATP-dependent RNA helicase activity	5.22E-03
20	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	5.60E-03
21	GO:0045330: aspartyl esterase activity	1.04E-02
22	GO:0016740: transferase activity	1.07E-02
23	GO:0030599: pectinesterase activity	1.19E-02
24	GO:0051082: unfolded protein binding	1.24E-02
25	GO:0004386: helicase activity	1.32E-02
26	GO:0015144: carbohydrate transmembrane transporter activity	1.65E-02
27	GO:0046910: pectinesterase inhibitor activity	1.74E-02
28	GO:0044212: transcription regulatory region DNA binding	1.78E-02
29	GO:0005351: sugar:proton symporter activity	1.80E-02
30	GO:0008168: methyltransferase activity	2.43E-02
31	GO:0000287: magnesium ion binding	2.46E-02
32	GO:0003700: transcription factor activity, sequence-specific DNA binding	3.04E-02
33	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.49E-02
34	GO:0004722: protein serine/threonine phosphatase activity	3.53E-02
35	GO:0009055: electron carrier activity	4.04E-02
36	GO:0005515: protein binding	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0005674: transcription factor TFIIF complex	0.00E+00
2	GO:0005789: endoplasmic reticulum membrane	1.48E-04
3	GO:0016282: eukaryotic 43S preinitiation complex	4.48E-04
4	GO:0016363: nuclear matrix	5.36E-04
5	GO:0033290: eukaryotic 48S preinitiation complex	5.36E-04
6	GO:0030687: preribosome, large subunit precursor	6.27E-04
7	GO:0031305: integral component of mitochondrial inner membrane	7.22E-04
8	GO:0005623: cell	1.33E-03
9	GO:0030176: integral component of endoplasmic reticulum membrane	1.72E-03
10	GO:0005744: mitochondrial inner membrane presequence translocase complex	2.69E-03
11	GO:0071944: cell periphery	3.97E-03
12	GO:0005743: mitochondrial inner membrane	4.60E-03
13	GO:0005783: endoplasmic reticulum	9.31E-03
14	GO:0005635: nuclear envelope	1.02E-02
15	GO:0009706: chloroplast inner membrane	1.24E-02
16	GO:0005802: trans-Golgi network	1.41E-02
17	GO:0009543: chloroplast thylakoid lumen	1.46E-02
18	GO:0005768: endosome	1.60E-02
19	GO:0016021: integral component of membrane	1.83E-02
20	GO:0000139: Golgi membrane	2.41E-02
21	GO:0005737: cytoplasm	3.41E-02