gene detail

Gene description

TAIR ID: AT3G08680

Short description: Leucine-rich repeat protein kinase family protein

Pathogen responsiveness: -1.14

General responsiveness: -1.50

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

protein phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway

GO cellular component

plasma membrane, plant-type cell wall, extracellular region, integral component of membrane, plasmodesma

GO molecular function

kinase activity, protein serine/threonine kinase activity, ATP binding, protein kinase activity

Protein domain

Pfam	PF07714, Protein tyrosine kinase
Pfam	PF08263, Leucine rich repeat N-terminal domain

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G20770, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 9 (Top20%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

10 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	-1.81	3.63E-06
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-1.89	1.09E-06
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-1.70	4.56E-06
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-1.82	2.54E-06
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.88	8.01E-03
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	-2.09	6.18E-03
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-1.73	1.54E-04
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	-1.70	4.95E-04
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-1.56	5.25E-05
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	-1.51	2.94E-04