gene detail

Gene description

TAIR ID: AT3G07500

Short description: Far-red impaired responsive (FAR1) family protein

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat:

TAAFFX.29120.1.S1_AT

GO biological process

far-red light signaling pathway, response to red or far red light, red, far-red light phototransduction, positive regulation of transcription, DNA-templated, positive regulation of circadian rhythm

GO cellular component

nucleus

GO molecular function

molecular_function, transcription factor activity, sequence-specific DNA binding

Protein domain

Pfam	PF03101, FAR1 DNA-binding domain

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G11260

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 6

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2 view
GSE45212_MED14_PSTDC3000_AVRRPT2 view

Differentially expressed condition

2 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.61	2.26E-09
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-1.84	1.12E-10