gene detail

Gene description

TAIR ID: AT3G03630

Short description: cysteine synthase 26

Pathogen responsiveness: -1.28

General responsiveness: 0.32

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

photosynthetic acclimation, cysteine biosynthetic process, regulation of hydrogen peroxide metabolic process, regulation of superoxide metabolic process, photosynthesis, cysteine biosynthetic process from serine

GO cellular component

chloroplast thylakoid lumen, chloroplast, mitochondrion, thylakoid lumen

GO molecular function

cysteine synthase activity, transferase activity, pyridoxal phosphate binding

Protein domain

Pfam	PF00291, Pyridoxal-phosphate dependent enzyme

Metabolic pathway

PWY-6936: seleno-amino acid biosynthesis
CYSTSYN-PWY: cysteine biosynthesis I

KEGG pathway

PATH:ath01200: Carbon metabolism
PATH:ath01230: Biosynthesis of amino acids
PATH:ath00920: Sulfur metabolism
PATH:ath00270: Cysteine and methionine metabolism

Transcriptional regulation

Regulator:
AT1G24260

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_EDS16_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

7 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	1.56	4.96E-04
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-1.55	1.66E-07
GSE21920	Col, WT, mock	Col, WT, Pto HopZ1a 6 h	-1.64	2.41E-03
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.63	1.68E-02
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-1.66	4.42E-13
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-1.61	9.98E-13
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-1.69	8.20E-10