gene detail

Gene description

TAIR ID: AT2G47160

Short description: HCO3- transporter family

Pathogen responsiveness: -1.03

General responsiveness: -0.76

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

borate transport, response to boron-containing substance, regulation of intracellular pH

GO cellular component

lateral plasma membrane, endosome, vacuole, plasma membrane, integral component of plasma membrane, integral component of membrane, cytoplasm

GO molecular function

anion:anion antiporter activity, borate transmembrane transporter activity, borate efflux transmembrane transporter activity, inorganic anion exchanger activity

Protein domain

Pfam	PF00955, HCO3- transporter family

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G61850, AT2G43010, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE56094_WT_HRPA-  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

3 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-2.22	7.98E-15
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-1.68	2.30E-13
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-2.05	2.50E-03