Gene: AT2G42280

Gene description

TAIR ID: AT2G42280

Short description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Pathogen responsiveness: -0.71

General responsiveness: -0.58


Rice: No orthologous gene


Wheat: No orthologous gene

GO biological process

regulation of transcription, DNA-templated, photoperiodism, flowering, transcription from RNA polymerase II promoter

GO cellular component


GO molecular function

transcription factor activity, sequence-specific DNA binding, DNA binding, core promoter sequence-specific DNA binding, transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding, protein dimerization activity

Protein domain

PfamPF00010, Helix-loop-helix DNA-binding domain

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

AT1G24260, AT2G20180


Protein-protein interaction network

The number of partners (degree) is: 4

click to view PPI network

Differentially expressed condition

6 conditions

SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.712.99E-09
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.683.30E-09
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.894.74E-10
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.221.39E-11
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.534.40E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d-3.553.45E-06

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