gene detail

Gene description

TAIR ID: AT2G42200

Short description: squamosa promoter binding protein-like 9

Pathogen responsiveness: -1.32

General responsiveness: -0.61

Orthologous

Rice:

OS08G0509600

Maize:

GRMZM2G307588

Wheat:

TAAFFX.51210.1.S1_AT

GO biological process

leaf development, regulation of transcription, DNA-templated, anther development, regulation of leaf formation, transcription, vegetative to reproductive phase transition of meristem

GO cellular component

nucleus, cytoplasm

GO molecular function

metal ion binding, DNA binding, transcription factor activity, sequence-specific DNA binding

Protein domain

Pfam	PF03110, SBP domain

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G69120, AT1G24260, AT2G47190

Target:
AT5G53200, AT2G30432

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

7 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	-2.43	6.40E-04
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	-1.99	3.20E-03
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	-2.49	5.50E-04
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-1.81	1.87E-10
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.72	4.74E-10
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-2.26	2.91E-12
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	-1.66	1.01E-09