gene detail

Gene description

TAIR ID: AT2G41820

Short description: Leucine-rich repeat protein kinase family protein

Pathogen responsiveness: -0.96

General responsiveness: -1.13

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G073928

Wheat:

TAAFFX.119870.1.A1_AT

GO biological process

protein phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway

GO cellular component

integral component of membrane, plasma membrane

GO molecular function

kinase activity, transmembrane receptor protein tyrosine kinase activity, protein serine/threonine kinase activity, ATP binding

Protein domain

Pfam	PF00560, Leucine Rich Repeat
Pfam	PF07714, Protein tyrosine kinase
Pfam	PF13855, Leucine rich repeat
SMART	SM00369, LRR_TYP

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT1G24260, AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 59 (Top5%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE26679_EDR1_GC  view

Differentially expressed condition

9 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, WT, control	Col, WT, Bg h	-1.59	2.26E-06
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	-1.62	1.40E-06
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.61	1.91E-02
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	-2.09	7.86E-03
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	-1.96	1.22E-02
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	-1.90	1.49E-02
GSE50526	Col, WT, mock 9 h	Col, WT, A. brassicicola 9 h	-1.87	1.46E-04
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	-2.23	1.80E-02
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-1.62	3.29E-03