GO Enrichment Analysis of Co-expressed Genes with
AT2G41820
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 2 | GO:0090391: granum assembly | 1.53E-10 |
| 3 | GO:0009772: photosynthetic electron transport in photosystem II | 8.60E-06 |
| 4 | GO:0010196: nonphotochemical quenching | 8.60E-06 |
| 5 | GO:0015995: chlorophyll biosynthetic process | 1.21E-05 |
| 6 | GO:0042759: long-chain fatty acid biosynthetic process | 3.64E-05 |
| 7 | GO:0042371: vitamin K biosynthetic process | 3.64E-05 |
| 8 | GO:0005980: glycogen catabolic process | 3.64E-05 |
| 9 | GO:0010541: acropetal auxin transport | 9.09E-05 |
| 10 | GO:0008616: queuosine biosynthetic process | 9.09E-05 |
| 11 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.20E-04 |
| 12 | GO:0010160: formation of animal organ boundary | 1.58E-04 |
| 13 | GO:1901332: negative regulation of lateral root development | 2.33E-04 |
| 14 | GO:0071484: cellular response to light intensity | 2.33E-04 |
| 15 | GO:0009102: biotin biosynthetic process | 2.33E-04 |
| 16 | GO:0051639: actin filament network formation | 2.33E-04 |
| 17 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 2.33E-04 |
| 18 | GO:0009828: plant-type cell wall loosening | 2.57E-04 |
| 19 | GO:0010027: thylakoid membrane organization | 3.08E-04 |
| 20 | GO:0051764: actin crosslink formation | 3.14E-04 |
| 21 | GO:0010236: plastoquinone biosynthetic process | 4.01E-04 |
| 22 | GO:0060918: auxin transport | 4.92E-04 |
| 23 | GO:0015979: photosynthesis | 5.34E-04 |
| 24 | GO:0042372: phylloquinone biosynthetic process | 5.88E-04 |
| 25 | GO:0009664: plant-type cell wall organization | 8.04E-04 |
| 26 | GO:0010206: photosystem II repair | 1.01E-03 |
| 27 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.12E-03 |
| 28 | GO:0006949: syncytium formation | 1.24E-03 |
| 29 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.24E-03 |
| 30 | GO:0009773: photosynthetic electron transport in photosystem I | 1.36E-03 |
| 31 | GO:0008361: regulation of cell size | 1.49E-03 |
| 32 | GO:0010207: photosystem II assembly | 1.76E-03 |
| 33 | GO:0010540: basipetal auxin transport | 1.76E-03 |
| 34 | GO:0009266: response to temperature stimulus | 1.76E-03 |
| 35 | GO:0010025: wax biosynthetic process | 2.04E-03 |
| 36 | GO:0045490: pectin catabolic process | 2.04E-03 |
| 37 | GO:0051017: actin filament bundle assembly | 2.18E-03 |
| 38 | GO:0016998: cell wall macromolecule catabolic process | 2.48E-03 |
| 39 | GO:0030245: cellulose catabolic process | 2.64E-03 |
| 40 | GO:0048443: stamen development | 2.96E-03 |
| 41 | GO:0009826: unidimensional cell growth | 3.01E-03 |
| 42 | GO:0080022: primary root development | 3.30E-03 |
| 43 | GO:0006508: proteolysis | 3.34E-03 |
| 44 | GO:0009958: positive gravitropism | 3.47E-03 |
| 45 | GO:0015986: ATP synthesis coupled proton transport | 3.64E-03 |
| 46 | GO:0080167: response to karrikin | 3.87E-03 |
| 47 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 4.00E-03 |
| 48 | GO:0009639: response to red or far red light | 4.56E-03 |
| 49 | GO:0009627: systemic acquired resistance | 5.55E-03 |
| 50 | GO:0010411: xyloglucan metabolic process | 5.76E-03 |
| 51 | GO:0010311: lateral root formation | 6.39E-03 |
| 52 | GO:0010218: response to far red light | 6.61E-03 |
| 53 | GO:0048527: lateral root development | 6.83E-03 |
| 54 | GO:0009637: response to blue light | 7.28E-03 |
| 55 | GO:0009734: auxin-activated signaling pathway | 8.01E-03 |
| 56 | GO:0010114: response to red light | 8.68E-03 |
| 57 | GO:0009926: auxin polar transport | 8.68E-03 |
| 58 | GO:0009640: photomorphogenesis | 8.68E-03 |
| 59 | GO:0042546: cell wall biogenesis | 8.93E-03 |
| 60 | GO:0009735: response to cytokinin | 9.23E-03 |
| 61 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.10E-02 |
| 62 | GO:0042545: cell wall modification | 1.34E-02 |
| 63 | GO:0009742: brassinosteroid mediated signaling pathway | 1.43E-02 |
| 64 | GO:0071555: cell wall organization | 2.05E-02 |
| 65 | GO:0009739: response to gibberellin | 2.19E-02 |
| 66 | GO:0007166: cell surface receptor signaling pathway | 2.23E-02 |
| 67 | GO:0010468: regulation of gene expression | 2.29E-02 |
| 68 | GO:0009733: response to auxin | 2.31E-02 |
| 69 | GO:0009658: chloroplast organization | 2.76E-02 |
| 70 | GO:0045454: cell redox homeostasis | 3.66E-02 |
| 71 | GO:0045892: negative regulation of transcription, DNA-templated | 3.70E-02 |
| 72 | GO:0032259: methylation | 4.12E-02 |
| 73 | GO:0016042: lipid catabolic process | 4.16E-02 |
| 74 | GO:0009408: response to heat | 4.25E-02 |
| 75 | GO:0007165: signal transduction | 4.26E-02 |
| 76 | GO:0048364: root development | 4.38E-02 |
| 77 | GO:0006468: protein phosphorylation | 4.76E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004076: biotin synthase activity | 0.00E+00 |
| 2 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 3 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 4 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 5 | GO:0004645: phosphorylase activity | 3.64E-05 |
| 6 | GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity | 3.64E-05 |
| 7 | GO:0008184: glycogen phosphorylase activity | 3.64E-05 |
| 8 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 3.64E-05 |
| 9 | GO:0008479: queuine tRNA-ribosyltransferase activity | 9.09E-05 |
| 10 | GO:0001872: (1->3)-beta-D-glucan binding | 2.33E-04 |
| 11 | GO:0016851: magnesium chelatase activity | 2.33E-04 |
| 12 | GO:0004659: prenyltransferase activity | 3.14E-04 |
| 13 | GO:0010329: auxin efflux transmembrane transporter activity | 1.62E-03 |
| 14 | GO:0030170: pyridoxal phosphate binding | 1.65E-03 |
| 15 | GO:0004252: serine-type endopeptidase activity | 1.65E-03 |
| 16 | GO:0005528: FK506 binding | 2.18E-03 |
| 17 | GO:0004707: MAP kinase activity | 2.48E-03 |
| 18 | GO:0030570: pectate lyase activity | 2.80E-03 |
| 19 | GO:0008810: cellulase activity | 2.80E-03 |
| 20 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 3.47E-03 |
| 21 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 4.00E-03 |
| 22 | GO:0051015: actin filament binding | 4.37E-03 |
| 23 | GO:0008483: transaminase activity | 4.75E-03 |
| 24 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 5.76E-03 |
| 25 | GO:0030247: polysaccharide binding | 5.76E-03 |
| 26 | GO:0008236: serine-type peptidase activity | 5.97E-03 |
| 27 | GO:0051539: 4 iron, 4 sulfur cluster binding | 7.97E-03 |
| 28 | GO:0004185: serine-type carboxypeptidase activity | 8.68E-03 |
| 29 | GO:0051537: 2 iron, 2 sulfur cluster binding | 9.17E-03 |
| 30 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 9.68E-03 |
| 31 | GO:0003777: microtubule motor activity | 1.15E-02 |
| 32 | GO:0045330: aspartyl esterase activity | 1.15E-02 |
| 33 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 1.23E-02 |
| 34 | GO:0030599: pectinesterase activity | 1.32E-02 |
| 35 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.34E-02 |
| 36 | GO:0005507: copper ion binding | 1.44E-02 |
| 37 | GO:0016829: lyase activity | 1.70E-02 |
| 38 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 1.92E-02 |
| 39 | GO:0046910: pectinesterase inhibitor activity | 1.92E-02 |
| 40 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.40E-02 |
| 41 | GO:0008168: methyltransferase activity | 2.69E-02 |
| 42 | GO:0016788: hydrolase activity, acting on ester bonds | 2.80E-02 |
| 43 | GO:0052689: carboxylic ester hydrolase activity | 3.46E-02 |
| 44 | GO:0009055: electron carrier activity | 4.46E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009515: granal stacked thylakoid | 0.00E+00 |
| 2 | GO:0009534: chloroplast thylakoid | 2.29E-09 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 4.25E-07 |
| 4 | GO:0005618: cell wall | 3.59E-06 |
| 5 | GO:0009579: thylakoid | 2.57E-05 |
| 6 | GO:0030095: chloroplast photosystem II | 5.37E-05 |
| 7 | GO:0005576: extracellular region | 6.73E-05 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 1.21E-04 |
| 9 | GO:0010007: magnesium chelatase complex | 1.58E-04 |
| 10 | GO:0032432: actin filament bundle | 2.33E-04 |
| 11 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 4.92E-04 |
| 12 | GO:0009570: chloroplast stroma | 6.57E-04 |
| 13 | GO:0005884: actin filament | 1.36E-03 |
| 14 | GO:0009941: chloroplast envelope | 1.49E-03 |
| 15 | GO:0009507: chloroplast | 1.93E-03 |
| 16 | GO:0009523: photosystem II | 3.82E-03 |
| 17 | GO:0010319: stromule | 4.75E-03 |
| 18 | GO:0009505: plant-type cell wall | 4.82E-03 |
| 19 | GO:0009706: chloroplast inner membrane | 1.37E-02 |
| 20 | GO:0016020: membrane | 1.48E-02 |
| 21 | GO:0010287: plastoglobule | 1.55E-02 |
| 22 | GO:0031225: anchored component of membrane | 1.58E-02 |
| 23 | GO:0005802: trans-Golgi network | 1.62E-02 |
| 24 | GO:0005768: endosome | 1.85E-02 |
| 25 | GO:0046658: anchored component of plasma membrane | 2.47E-02 |
| 26 | GO:0000139: Golgi membrane | 2.78E-02 |
| 27 | GO:0031969: chloroplast membrane | 3.22E-02 |