Gene: AT2G40490
Gene description
TAIR ID: AT2G40490
Short description: Uroporphyrinogen decarboxylase
Pathogen responsiveness: -0.86
General responsiveness: 1.52
GO biological process
heme biosynthetic process, chlorophyll biosynthetic process, protoporphyrinogen IX biosynthetic process, response to cytokinin
GO cellular component
chloroplast stroma, chloroplast, chloroplast envelope, cytosol
GO molecular function
uroporphyrinogen decarboxylase activity
Metabolic pathway
PWY-5918: superpathay of heme biosynthesis from glutamate
HEME-BIOSYNTHESIS-II: heme biosynthesis from uroporphyrinogen-III I
CHLOROPHYLL-SYN: chlorophyllide a biosynthesis I (aerobic, light-dependent)
PWYQT-62: superpathway of proto- and siroheme biosynthesis
Transcriptional regulation
Regulator:
AT5G56110, AT3G24050, AT3G16857, AT4G16110, AT4G34680, AT2G45050, AT3G60530, AT2G47190
Target:
none
click to view PPI networkCoexpression network
Differentially expressed condition 
7 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE17500 | Col, WT, control 0 h | Col, WT, PstDC3000 24 h | -1.54 | 1.26E-04 |
| GSE18978 | Col, WT, control 24 h | Col, WT, PsmES4326 24 h | -1.96 | 6.95E-10 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 12 h | -2.36 | 1.72E-12 |
| GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 8 h | -1.75 | 1.78E-10 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 12 h | -2.31 | 2.62E-12 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 8 h | -1.85 | 5.74E-11 |
| GSE56094 | Col, WT, control 11 h | Col, WT, PstDC3000 11 h | -1.56 | 2.16E-14 |
Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.