co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G40490

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1904277: negative regulation of wax biosynthetic process	0.00E+00
2	GO:0006849: plasma membrane pyruvate transport	0.00E+00
3	GO:0015742: alpha-ketoglutarate transport	0.00E+00
4	GO:0010028: xanthophyll cycle	1.39E-05
5	GO:0007093: mitotic cell cycle checkpoint	1.39E-05
6	GO:0051304: chromosome separation	3.65E-05
7	GO:0016122: xanthophyll metabolic process	3.65E-05
8	GO:0010270: photosystem II oxygen evolving complex assembly	3.65E-05
9	GO:0006814: sodium ion transport	4.82E-05
10	GO:0042254: ribosome biogenesis	6.40E-05
11	GO:0015729: oxaloacetate transport	9.94E-05
12	GO:0015995: chlorophyll biosynthetic process	1.04E-04
13	GO:0019676: ammonia assimilation cycle	1.37E-04
14	GO:0015743: malate transport	1.37E-04
15	GO:0015994: chlorophyll metabolic process	1.37E-04
16	GO:0071423: malate transmembrane transport	1.78E-04
17	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	2.22E-04
18	GO:0000470: maturation of LSU-rRNA	2.22E-04
19	GO:0006828: manganese ion transport	2.22E-04
20	GO:0005978: glycogen biosynthetic process	3.65E-04
21	GO:0006783: heme biosynthetic process	4.68E-04
22	GO:0006782: protoporphyrinogen IX biosynthetic process	5.78E-04
23	GO:0006816: calcium ion transport	6.34E-04
24	GO:0051017: actin filament bundle assembly	1.00E-03
25	GO:0000027: ribosomal large subunit assembly	1.00E-03
26	GO:0009768: photosynthesis, light harvesting in photosystem I	1.07E-03
27	GO:0007017: microtubule-based process	1.07E-03
28	GO:0016114: terpenoid biosynthetic process	1.13E-03
29	GO:0006412: translation	1.15E-03
30	GO:0015979: photosynthesis	1.36E-03
31	GO:0019252: starch biosynthetic process	1.72E-03
32	GO:0010583: response to cyclopentenone	1.88E-03
33	GO:0019760: glucosinolate metabolic process	2.04E-03
34	GO:0006499: N-terminal protein myristoylation	2.94E-03
35	GO:0006631: fatty acid metabolic process	3.63E-03
36	GO:0006457: protein folding	3.95E-03
37	GO:0009624: response to nematode	5.98E-03
38	GO:0015031: protein transport	7.82E-03
39	GO:0006633: fatty acid biosynthetic process	8.19E-03
40	GO:0009409: response to cold	8.33E-03
41	GO:0046777: protein autophosphorylation	1.45E-02
42	GO:0045454: cell redox homeostasis	1.57E-02
43	GO:0009408: response to heat	1.82E-02
44	GO:0009753: response to jasmonic acid	1.92E-02
45	GO:0009873: ethylene-activated signaling pathway	2.19E-02
46	GO:0009416: response to light stimulus	2.74E-02
47	GO:0045893: positive regulation of transcription, DNA-templated	3.03E-02
48	GO:0055085: transmembrane transport	3.25E-02
49	GO:0009414: response to water deprivation	4.46E-02
50	GO:0042742: defense response to bacterium	4.54E-02

Rank	GO Term	Adjusted P value
1	GO:0015139: alpha-ketoglutarate transmembrane transporter activity	0.00E+00
2	GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity	0.00E+00
3	GO:0046422: violaxanthin de-epoxidase activity	0.00E+00
4	GO:0004853: uroporphyrinogen decarboxylase activity	1.39E-05
5	GO:0019843: rRNA binding	1.89E-05
6	GO:0016630: protochlorophyllide reductase activity	3.65E-05
7	GO:0015367: oxoglutarate:malate antiporter activity	3.65E-05
8	GO:0008967: phosphoglycolate phosphatase activity	3.65E-05
9	GO:0050833: pyruvate transmembrane transporter activity	6.55E-05
10	GO:0015131: oxaloacetate transmembrane transporter activity	9.94E-05
11	GO:0008508: bile acid:sodium symporter activity	9.94E-05
12	GO:0008878: glucose-1-phosphate adenylyltransferase activity	1.37E-04
13	GO:0003959: NADPH dehydrogenase activity	1.78E-04
14	GO:0003735: structural constituent of ribosome	2.64E-04
15	GO:0051920: peroxiredoxin activity	2.68E-04
16	GO:0015140: malate transmembrane transporter activity	3.15E-04
17	GO:0016209: antioxidant activity	3.65E-04
18	GO:0005384: manganese ion transmembrane transporter activity	5.23E-04
19	GO:0000976: transcription regulatory region sequence-specific DNA binding	6.93E-04
20	GO:0015095: magnesium ion transmembrane transporter activity	7.52E-04
21	GO:0031409: pigment binding	9.38E-04
22	GO:0051015: actin filament binding	1.96E-03
23	GO:0005200: structural constituent of cytoskeleton	2.13E-03
24	GO:0008237: metallopeptidase activity	2.13E-03
25	GO:0016168: chlorophyll binding	2.39E-03
26	GO:0004222: metalloendopeptidase activity	2.94E-03
27	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.42E-03
28	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.26E-03
29	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	5.38E-03
30	GO:0005215: transporter activity	6.81E-03
31	GO:0004601: peroxidase activity	1.19E-02
32	GO:0003924: GTPase activity	1.82E-02
33	GO:0016740: transferase activity	3.16E-02
34	GO:0005525: GTP binding	3.91E-02
35	GO:0044212: transcription regulatory region DNA binding	4.54E-02

Rank	GO Term	Adjusted P value
1	GO:0010170: glucose-1-phosphate adenylyltransferase complex	0.00E+00
2	GO:0009507: chloroplast	5.10E-13
3	GO:0009941: chloroplast envelope	6.32E-11
4	GO:0009535: chloroplast thylakoid membrane	6.83E-11
5	GO:0009570: chloroplast stroma	8.04E-09
6	GO:0009534: chloroplast thylakoid	3.09E-08
7	GO:0031969: chloroplast membrane	8.58E-05
8	GO:0005840: ribosome	8.79E-05
9	GO:0009706: chloroplast inner membrane	3.81E-04
10	GO:0009579: thylakoid	4.12E-04
11	GO:0045298: tubulin complex	4.68E-04
12	GO:0030095: chloroplast photosystem II	8.13E-04
13	GO:0030076: light-harvesting complex	8.75E-04
14	GO:0022625: cytosolic large ribosomal subunit	1.26E-03
15	GO:0015629: actin cytoskeleton	1.27E-03
16	GO:0010319: stromule	2.13E-03
17	GO:0016020: membrane	3.35E-03
18	GO:0031977: thylakoid lumen	3.63E-03
19	GO:0005856: cytoskeleton	4.15E-03
20	GO:0010287: plastoglobule	6.73E-03
21	GO:0009543: chloroplast thylakoid lumen	6.99E-03
22	GO:0005874: microtubule	1.35E-02
23	GO:0022626: cytosolic ribosome	2.66E-02