GO Enrichment Analysis of Co-expressed Genes with
AT2G40490
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
| 2 | GO:0032928: regulation of superoxide anion generation | 0.00E+00 |
| 3 | GO:0018160: peptidyl-pyrromethane cofactor linkage | 0.00E+00 |
| 4 | GO:0007172: signal complex assembly | 0.00E+00 |
| 5 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
| 6 | GO:0015995: chlorophyll biosynthetic process | 8.97E-09 |
| 7 | GO:0016122: xanthophyll metabolic process | 1.88E-07 |
| 8 | GO:0006782: protoporphyrinogen IX biosynthetic process | 5.23E-07 |
| 9 | GO:0015979: photosynthesis | 9.08E-06 |
| 10 | GO:0006783: heme biosynthetic process | 3.71E-05 |
| 11 | GO:0006779: porphyrin-containing compound biosynthetic process | 4.56E-05 |
| 12 | GO:0010028: xanthophyll cycle | 5.64E-05 |
| 13 | GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | 5.64E-05 |
| 14 | GO:0005980: glycogen catabolic process | 5.64E-05 |
| 15 | GO:0018026: peptidyl-lysine monomethylation | 1.37E-04 |
| 16 | GO:0090391: granum assembly | 2.34E-04 |
| 17 | GO:0045493: xylan catabolic process | 2.34E-04 |
| 18 | GO:0010306: rhamnogalacturonan II biosynthetic process | 3.41E-04 |
| 19 | GO:0050482: arachidonic acid secretion | 3.41E-04 |
| 20 | GO:0010583: response to cyclopentenone | 3.99E-04 |
| 21 | GO:0015994: chlorophyll metabolic process | 4.56E-04 |
| 22 | GO:0030007: cellular potassium ion homeostasis | 4.56E-04 |
| 23 | GO:0010117: photoprotection | 5.78E-04 |
| 24 | GO:0010411: xyloglucan metabolic process | 6.28E-04 |
| 25 | GO:0009913: epidermal cell differentiation | 7.07E-04 |
| 26 | GO:0010190: cytochrome b6f complex assembly | 7.07E-04 |
| 27 | GO:0009942: longitudinal axis specification | 8.44E-04 |
| 28 | GO:0050829: defense response to Gram-negative bacterium | 9.85E-04 |
| 29 | GO:0006644: phospholipid metabolic process | 1.13E-03 |
| 30 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 1.13E-03 |
| 31 | GO:0006353: DNA-templated transcription, termination | 1.13E-03 |
| 32 | GO:0007389: pattern specification process | 1.29E-03 |
| 33 | GO:0010206: photosystem II repair | 1.45E-03 |
| 34 | GO:0034765: regulation of ion transmembrane transport | 1.45E-03 |
| 35 | GO:0009688: abscisic acid biosynthetic process | 1.79E-03 |
| 36 | GO:0006949: syncytium formation | 1.79E-03 |
| 37 | GO:0009773: photosynthetic electron transport in photosystem I | 1.97E-03 |
| 38 | GO:0010207: photosystem II assembly | 2.56E-03 |
| 39 | GO:0009266: response to temperature stimulus | 2.56E-03 |
| 40 | GO:0009934: regulation of meristem structural organization | 2.56E-03 |
| 41 | GO:0007017: microtubule-based process | 3.40E-03 |
| 42 | GO:0016998: cell wall macromolecule catabolic process | 3.63E-03 |
| 43 | GO:0051260: protein homooligomerization | 3.63E-03 |
| 44 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 4.10E-03 |
| 45 | GO:0048868: pollen tube development | 5.09E-03 |
| 46 | GO:0009741: response to brassinosteroid | 5.09E-03 |
| 47 | GO:0007018: microtubule-based movement | 5.35E-03 |
| 48 | GO:0048825: cotyledon development | 5.61E-03 |
| 49 | GO:0000302: response to reactive oxygen species | 5.88E-03 |
| 50 | GO:0010193: response to ozone | 5.88E-03 |
| 51 | GO:0009828: plant-type cell wall loosening | 6.71E-03 |
| 52 | GO:0010252: auxin homeostasis | 6.71E-03 |
| 53 | GO:0071805: potassium ion transmembrane transport | 7.00E-03 |
| 54 | GO:0071555: cell wall organization | 7.45E-03 |
| 55 | GO:0010029: regulation of seed germination | 7.89E-03 |
| 56 | GO:0016042: lipid catabolic process | 9.72E-03 |
| 57 | GO:0010119: regulation of stomatal movement | 1.01E-02 |
| 58 | GO:0007568: aging | 1.01E-02 |
| 59 | GO:0016051: carbohydrate biosynthetic process | 1.08E-02 |
| 60 | GO:0034599: cellular response to oxidative stress | 1.11E-02 |
| 61 | GO:0006631: fatty acid metabolic process | 1.22E-02 |
| 62 | GO:0009926: auxin polar transport | 1.29E-02 |
| 63 | GO:0042546: cell wall biogenesis | 1.33E-02 |
| 64 | GO:0009664: plant-type cell wall organization | 1.51E-02 |
| 65 | GO:0009735: response to cytokinin | 1.63E-02 |
| 66 | GO:0010224: response to UV-B | 1.63E-02 |
| 67 | GO:0042545: cell wall modification | 2.00E-02 |
| 68 | GO:0009742: brassinosteroid mediated signaling pathway | 2.13E-02 |
| 69 | GO:0009845: seed germination | 2.54E-02 |
| 70 | GO:0042744: hydrogen peroxide catabolic process | 2.63E-02 |
| 71 | GO:0007623: circadian rhythm | 3.02E-02 |
| 72 | GO:0045490: pectin catabolic process | 3.02E-02 |
| 73 | GO:0009826: unidimensional cell growth | 4.01E-02 |
| 74 | GO:0009860: pollen tube growth | 4.34E-02 |
| 75 | GO:0080167: response to karrikin | 4.80E-02 |
| 76 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 2 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 3 | GO:0004418: hydroxymethylbilane synthase activity | 0.00E+00 |
| 4 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 5 | GO:0015269: calcium-activated potassium channel activity | 0.00E+00 |
| 6 | GO:0004645: phosphorylase activity | 5.64E-05 |
| 7 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 5.64E-05 |
| 8 | GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity | 5.64E-05 |
| 9 | GO:0008184: glycogen phosphorylase activity | 5.64E-05 |
| 10 | GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity | 5.64E-05 |
| 11 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 5.64E-05 |
| 12 | GO:0004853: uroporphyrinogen decarboxylase activity | 5.64E-05 |
| 13 | GO:0016868: intramolecular transferase activity, phosphotransferases | 1.37E-04 |
| 14 | GO:0016851: magnesium chelatase activity | 3.41E-04 |
| 15 | GO:0009044: xylan 1,4-beta-xylosidase activity | 4.56E-04 |
| 16 | GO:0046556: alpha-L-arabinofuranosidase activity | 4.56E-04 |
| 17 | GO:0016279: protein-lysine N-methyltransferase activity | 4.56E-04 |
| 18 | GO:0004623: phospholipase A2 activity | 5.78E-04 |
| 19 | GO:0015271: outward rectifier potassium channel activity | 7.07E-04 |
| 20 | GO:0004130: cytochrome-c peroxidase activity | 7.07E-04 |
| 21 | GO:0005267: potassium channel activity | 1.29E-03 |
| 22 | GO:0009672: auxin:proton symporter activity | 1.62E-03 |
| 23 | GO:0015020: glucuronosyltransferase activity | 1.79E-03 |
| 24 | GO:0031072: heat shock protein binding | 2.36E-03 |
| 25 | GO:0010329: auxin efflux transmembrane transporter activity | 2.36E-03 |
| 26 | GO:0005216: ion channel activity | 3.40E-03 |
| 27 | GO:0033612: receptor serine/threonine kinase binding | 3.63E-03 |
| 28 | GO:0003756: protein disulfide isomerase activity | 4.34E-03 |
| 29 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 5.88E-03 |
| 30 | GO:0005200: structural constituent of cytoskeleton | 7.00E-03 |
| 31 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 7.00E-03 |
| 32 | GO:0008375: acetylglucosaminyltransferase activity | 8.19E-03 |
| 33 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 8.50E-03 |
| 34 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 8.81E-03 |
| 35 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 1.15E-02 |
| 36 | GO:0043621: protein self-association | 1.36E-02 |
| 37 | GO:0008289: lipid binding | 1.40E-02 |
| 38 | GO:0003777: microtubule motor activity | 1.71E-02 |
| 39 | GO:0045330: aspartyl esterase activity | 1.71E-02 |
| 40 | GO:0004650: polygalacturonase activity | 1.92E-02 |
| 41 | GO:0030599: pectinesterase activity | 1.96E-02 |
| 42 | GO:0051082: unfolded protein binding | 2.04E-02 |
| 43 | GO:0016829: lyase activity | 2.54E-02 |
| 44 | GO:0030170: pyridoxal phosphate binding | 2.58E-02 |
| 45 | GO:0046910: pectinesterase inhibitor activity | 2.87E-02 |
| 46 | GO:0008017: microtubule binding | 3.12E-02 |
| 47 | GO:0004601: peroxidase activity | 4.12E-02 |
| 48 | GO:0016788: hydrolase activity, acting on ester bonds | 4.17E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
| 2 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 1.94E-17 |
| 4 | GO:0009534: chloroplast thylakoid | 2.21E-17 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 2.88E-16 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 2.38E-10 |
| 7 | GO:0009579: thylakoid | 8.13E-06 |
| 8 | GO:0009570: chloroplast stroma | 2.30E-05 |
| 9 | GO:0009538: photosystem I reaction center | 2.31E-05 |
| 10 | GO:0031977: thylakoid lumen | 6.78E-05 |
| 11 | GO:0009508: plastid chromosome | 8.84E-05 |
| 12 | GO:0030095: chloroplast photosystem II | 1.02E-04 |
| 13 | GO:0030093: chloroplast photosystem I | 1.37E-04 |
| 14 | GO:0010007: magnesium chelatase complex | 2.34E-04 |
| 15 | GO:0009941: chloroplast envelope | 2.62E-04 |
| 16 | GO:0009522: photosystem I | 3.25E-04 |
| 17 | GO:0042646: plastid nucleoid | 3.41E-04 |
| 18 | GO:0009517: PSII associated light-harvesting complex II | 4.56E-04 |
| 19 | GO:0009295: nucleoid | 4.79E-04 |
| 20 | GO:0016363: nuclear matrix | 8.44E-04 |
| 21 | GO:0042644: chloroplast nucleoid | 1.45E-03 |
| 22 | GO:0045298: tubulin complex | 1.45E-03 |
| 23 | GO:0010287: plastoglobule | 2.45E-03 |
| 24 | GO:0005618: cell wall | 3.06E-03 |
| 25 | GO:0031410: cytoplasmic vesicle | 3.86E-03 |
| 26 | GO:0005871: kinesin complex | 4.58E-03 |
| 27 | GO:0071944: cell periphery | 6.43E-03 |
| 28 | GO:0005874: microtubule | 6.55E-03 |
| 29 | GO:0031969: chloroplast membrane | 6.77E-03 |
| 30 | GO:0016020: membrane | 8.66E-03 |
| 31 | GO:0009505: plant-type cell wall | 9.93E-03 |
| 32 | GO:0000325: plant-type vacuole | 1.01E-02 |
| 33 | GO:0009706: chloroplast inner membrane | 2.04E-02 |
| 34 | GO:0009506: plasmodesma | 2.46E-02 |
| 35 | GO:0016021: integral component of membrane | 3.00E-02 |
| 36 | GO:0048046: apoplast | 3.79E-02 |
| 37 | GO:0009536: plastid | 4.41E-02 |