gene detail

Gene description

TAIR ID: AT2G39480

Short description: P-glycoprotein 6

Pathogen responsiveness: -0.85

General responsiveness: -1.57

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

transmembrane transport

GO cellular component

plasmodesma, plasma membrane, integral component of membrane, nucleus

GO molecular function

ATPase activity, coupled to transmembrane movement of substances, ATP binding

Protein domain

Pfam	PF00664, ABC transporter transmembrane region
Pfam	PF00005, ABC transporter
SMART	SM00382, AAA

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath02010: ABC transporters

Transcriptional regulation

Regulator:
AT1G24260

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

Coexpression network

Differentially expressed condition

12 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE16472	Col, WT, Flg22 0 min	Col, WT, Flg22 60min	1.63	3.85E-02
GSE17464	Laer, control	Laer, Flg22 1 h	2.11	2.41E-06
GSE17464	Laer, control	Laer, Flg22 2 h	1.54	4.08E-04
GSE17464	Penta, control	Penta, Flg22 2 h	2.23	8.59E-07
GSE17464	Penta, control	Penta, Flg22 2 h	1.62	1.94E-04
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	1.69	1.34E-05
GSE18329	Col, wrky72_1, control	Col, wrky72_1, Hpa noco2 96 h	1.56	1.09E-10
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	2.04	5.39E-08
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	1.68	2.51E-10
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	1.59	6.98E-10
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	2.11	2.17E-12
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.56	2.27E-02